Description : Rhomboid family protein
Description : coiled-coil protein
Gene families : OG_02_0020130 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023049 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_46 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000725 | recombinational repair | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005811 | lipid droplet | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006275 | regulation of DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006302 | double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006310 | DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006334 | nucleosome assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006337 | nucleosome disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006914 | autophagy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008156 | negative regulation of DNA replication | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010212 | response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010332 | response to gamma radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016236 | macroautophagy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016444 | somatic cell DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022411 | cellular component disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030308 | negative regulation of cell growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030433 | ubiquitin-dependent ERAD pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030855 | epithelial cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030968 | endoplasmic reticulum unfolded protein response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031396 | regulation of protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031398 | positive regulation of protein ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032386 | regulation of intracellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032387 | negative regulation of intracellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032986 | protein-DNA complex disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033157 | regulation of intracellular protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034976 | response to endoplasmic reticulum stress | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035523 | protein K29-linked deubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035871 | protein K11-linked deubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036503 | ERAD pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042393 | histone binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043549 | regulation of kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045446 | endothelial cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045859 | regulation of protein kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045926 | negative regulation of growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051051 | negative regulation of transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051223 | regulation of protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051224 | negative regulation of protein transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051896 | regulation of protein kinase B signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051897 | positive regulation of protein kinase B signaling | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061578 | Lys63-specific deubiquitinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070201 | regulation of establishment of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070536 | protein K63-linked deubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070861 | regulation of protein exit from endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070862 | negative regulation of protein exit from endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071108 | protein K48-linked deubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071479 | cellular response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071480 | cellular response to gamma radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090317 | negative regulation of intracellular protein transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0101005 | deubiquitinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903320 | regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903322 | positive regulation of protein modification by small protein conjugation or removal | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903828 | negative regulation of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904152 | regulation of retrograde protein transport, ER to cytosol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904153 | negative regulation of retrograde protein transport, ER to cytosol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904950 | negative regulation of establishment of protein localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990167 | protein K27-linked deubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990168 | protein K33-linked deubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990380 | Lys48-specific deubiquitinase activity | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |