SOLTUB.AGRIA.G00000025615


Description : Replication protein A 70 kDa DNA-binding subunit


Gene families : OG_02_0000001 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000025615
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_202


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000429 carbon catabolite regulation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
BP GO:0000436 carbon catabolite activation of transcription from RNA polymerase II promoter IEP Predict GO terms from Neighborhoods
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
MF GO:0001216 DNA-binding transcription activator activity IEP Predict GO terms from Neighborhoods
MF GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific IEP Predict GO terms from Neighborhoods
BP GO:0001934 positive regulation of protein phosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Predict GO terms from Neighborhoods
MF GO:0003713 transcription coactivator activity IEP Predict GO terms from Neighborhoods
MF GO:0005154 epidermal growth factor receptor binding IEP Predict GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Predict GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0007584 response to nutrient IEP Predict GO terms from Neighborhoods
BP GO:0009738 abscisic acid-activated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010476 gibberellin mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010562 positive regulation of phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010677 negative regulation of cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016602 CCAAT-binding factor complex IEP Predict GO terms from Neighborhoods
BP GO:0019221 cytokine-mediated signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0030015 CCR4-NOT core complex IEP Predict GO terms from Neighborhoods
MF GO:0030374 nuclear receptor coactivator activity IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0031670 cellular response to nutrient IEP Predict GO terms from Neighborhoods
BP GO:0032784 regulation of DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Predict GO terms from Neighborhoods
BP GO:0032881 regulation of polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032968 positive regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Predict GO terms from Neighborhoods
BP GO:0033135 regulation of peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0033138 positive regulation of peptidyl-serine phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0033143 regulation of intracellular steroid hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033144 negative regulation of intracellular steroid hormone receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033146 regulation of intracellular estrogen receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0033147 negative regulation of intracellular estrogen receptor signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0033620 Mei2 nuclear dot complex IEP Predict GO terms from Neighborhoods
BP GO:0034243 regulation of transcription elongation by RNA polymerase II IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
BP GO:0042058 regulation of epidermal growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0042327 positive regulation of phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0043457 regulation of cellular respiration IEP Predict GO terms from Neighborhoods
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predict GO terms from Neighborhoods
BP GO:0045742 positive regulation of epidermal growth factor receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0045893 positive regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0045912 negative regulation of carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045937 positive regulation of phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0045990 carbon catabolite regulation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0045991 carbon catabolite activation of transcription IEP Predict GO terms from Neighborhoods
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048584 positive regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048585 negative regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051254 positive regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0070851 growth factor receptor binding IEP Predict GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Predict GO terms from Neighborhoods
MF GO:0140110 transcription regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1901184 regulation of ERBB signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901186 positive regulation of ERBB signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:2000028 regulation of photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:2000030 regulation of response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:2000242 negative regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000306 positive regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:2000904 regulation of starch metabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000905 negative regulation of starch metabolic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012340 NA-bd_OB-fold 293 381
IPR013955 Rep_factor-A_C 308 422
IPR012340 NA-bd_OB-fold 124 251
IPR012340 NA-bd_OB-fold 5 109
No external refs found!