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  5. SOLTUB.AGRIA.G00000026402

SOLTUB.AGRIA.G00000026402


Description : Actin-related family protein


Gene families : OG_02_0004014 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026402
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_97

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000026389 No alias Actin-related protein 8 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000026389 No alias Actin-related protein 8 0.08 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000026389 No alias Actin-related protein 8 0.08 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005737 cytoplasm IEA AHRD
CC GO:0005869 dynactin complex IEA AHRD
BP GO:0007010 cytoskeleton organization IEA AHRD
BP GO:0009653 anatomical structure morphogenesis IEA AHRD
BP GO:0030029 actin filament-based process IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0000209 protein polyubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0000281 mitotic cytokinesis IEP Predict GO terms from Neighborhoods
BP GO:0000910 cytokinesis IEP Predict GO terms from Neighborhoods
CC GO:0000940 outer kinetochore IEP Predict GO terms from Neighborhoods
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0001093 TFIIB-class transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0001098 basal transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001099 basal RNA polymerase II transcription machinery binding IEP Predict GO terms from Neighborhoods
MF GO:0001221 transcription coregulator binding IEP Predict GO terms from Neighborhoods
MF GO:0001223 transcription coactivator binding IEP Predict GO terms from Neighborhoods
BP GO:0001817 regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0001818 negative regulation of cytokine production IEP Predict GO terms from Neighborhoods
MF GO:0002039 p53 binding IEP Predict GO terms from Neighborhoods
BP GO:0002221 pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0003684 damaged DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003713 transcription coactivator activity IEP Predict GO terms from Neighborhoods
MF GO:0003714 transcription corepressor activity IEP Predict GO terms from Neighborhoods
MF GO:0004402 histone acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004462 lactoylglutathione lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0004713 protein tyrosine kinase activity IEP Predict GO terms from Neighborhoods
CC GO:0005635 nuclear envelope IEP Predict GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Predict GO terms from Neighborhoods
CC GO:0005773 vacuole IEP Predict GO terms from Neighborhoods
CC GO:0005791 rough endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006081 cellular aldehyde metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006089 lactate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Predict GO terms from Neighborhoods
BP GO:0006473 protein acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006474 N-terminal protein amino acid acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006475 internal protein amino acid acetylation IEP Predict GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Predict GO terms from Neighborhoods
BP GO:0006513 protein monoubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
BP GO:0006970 response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0006997 nucleus organization IEP Predict GO terms from Neighborhoods
MF GO:0008080 N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008140 cAMP response element binding protein binding IEP Predict GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Predict GO terms from Neighborhoods
BP GO:0008283 cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0009266 response to temperature stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009409 response to cold IEP Predict GO terms from Neighborhoods
BP GO:0009438 methylglyoxal metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009553 embryo sac development IEP Predict GO terms from Neighborhoods
BP GO:0009593 detection of chemical stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009595 detection of biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009607 response to biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009628 response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0009651 response to salt stress IEP Predict GO terms from Neighborhoods
BP GO:0009751 response to salicylic acid IEP Predict GO terms from Neighborhoods
BP GO:0009756 carbohydrate mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009960 endosperm development IEP Predict GO terms from Neighborhoods
BP GO:0010167 response to nitrate IEP Predict GO terms from Neighborhoods
BP GO:0010182 sugar mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010712 regulation of collagen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010714 positive regulation of collagen metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0014070 response to organic cyclic compound IEP Predict GO terms from Neighborhoods
MF GO:0016407 acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016410 N-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Predict GO terms from Neighborhoods
BP GO:0016573 histone acetylation IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016835 carbon-oxygen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016836 hydro-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016846 carbon-sulfur lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0016925 protein sumoylation IEP Predict GO terms from Neighborhoods
BP GO:0017015 regulation of transforming growth factor beta receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0018076 N-terminal peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Predict GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Predict GO terms from Neighborhoods
BP GO:0018364 peptidyl-glutamine methylation IEP Predict GO terms from Neighborhoods
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
BP GO:0018394 peptidyl-lysine acetylation IEP Predict GO terms from Neighborhoods
MF GO:0019172 glyoxalase III activity IEP Predict GO terms from Neighborhoods
MF GO:0019199 transmembrane receptor protein kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019249 lactate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Predict GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Predict GO terms from Neighborhoods
BP GO:0030511 positive regulation of transforming growth factor beta receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0030674 protein-macromolecule adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0030718 germ-line stem cell population maintenance IEP Predict GO terms from Neighborhoods
BP GO:0031154 culmination involved in sorocarp development IEP Predict GO terms from Neighborhoods
CC GO:0031248 protein acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0031365 N-terminal protein amino acid modification IEP Predict GO terms from Neighborhoods
MF GO:0031435 mitogen-activated protein kinase kinase kinase binding IEP Predict GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0031648 protein destabilization IEP Predict GO terms from Neighborhoods
BP GO:0031663 lipopolysaccharide-mediated signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Predict GO terms from Neighborhoods
BP GO:0032479 regulation of type I interferon production IEP Predict GO terms from Neighborhoods
BP GO:0032480 negative regulation of type I interferon production IEP Predict GO terms from Neighborhoods
BP GO:0032490 detection of molecule of bacterial origin IEP Predict GO terms from Neighborhoods
BP GO:0032496 response to lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0032497 detection of lipopolysaccharide IEP Predict GO terms from Neighborhoods
BP GO:0032648 regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032688 negative regulation of interferon-beta production IEP Predict GO terms from Neighborhoods
BP GO:0032793 positive regulation of CREB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0032965 regulation of collagen biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0032967 positive regulation of collagen biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034103 regulation of tissue remodeling IEP Predict GO terms from Neighborhoods
MF GO:0034212 peptide N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0034605 cellular response to heat IEP Predict GO terms from Neighborhoods
BP GO:0034644 cellular response to UV IEP Predict GO terms from Neighborhoods
BP GO:0035295 tube development IEP Predict GO terms from Neighborhoods
BP GO:0035519 protein K29-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0035728 response to hepatocyte growth factor IEP Predict GO terms from Neighborhoods
BP GO:0035729 cellular response to hepatocyte growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Predict GO terms from Neighborhoods
MF GO:0038187 pattern recognition receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0039020 pronephric nephron tubule development IEP Predict GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042182 ketone catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0042975 peroxisome proliferator activated receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Predict GO terms from Neighborhoods
BP GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043207 response to external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Predict GO terms from Neighborhoods
MF GO:0043425 bHLH transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0043426 MRF binding IEP Predict GO terms from Neighborhoods
BP GO:0043484 regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0043543 protein acylation IEP Predict GO terms from Neighborhoods
BP GO:0044314 protein K27-linked ubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predict GO terms from Neighborhoods
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0045667 regulation of osteoblast differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045669 positive regulation of osteoblast differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045931 positive regulation of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0046185 aldehyde catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046332 SMAD binding IEP Predict GO terms from Neighborhoods
BP GO:0046850 regulation of bone remodeling IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048525 negative regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0048577 negative regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048583 regulation of response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0048586 regulation of long-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Predict GO terms from Neighborhoods
BP GO:0050684 regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050792 regulation of viral process IEP Predict GO terms from Neighborhoods
BP GO:0050794 regulation of cellular process IEP Predict GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051054 positive regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051091 positive regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051239 regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051241 negative regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051347 positive regulation of transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051596 methylglyoxal catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Predict GO terms from Neighborhoods
BP GO:0051703 biological process involved in intraspecies interaction between organisms IEP Predict GO terms from Neighborhoods
BP GO:0051707 response to other organism IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051972 regulation of telomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0051973 positive regulation of telomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0060325 face morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0060353 regulation of cell adhesion molecule production IEP Predict GO terms from Neighborhoods
BP GO:0060355 positive regulation of cell adhesion molecule production IEP Predict GO terms from Neighborhoods
BP GO:0060429 epithelium development IEP Predict GO terms from Neighborhoods
BP GO:0061326 renal tubule development IEP Predict GO terms from Neighborhoods
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0061631 ubiquitin conjugating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0061640 cytoskeleton-dependent cytokinesis IEP Predict GO terms from Neighborhoods
MF GO:0061650 ubiquitin-like protein conjugating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0061727 methylglyoxal catabolic process to lactate IEP Predict GO terms from Neighborhoods
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0070534 protein K63-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0070555 response to interleukin-1 IEP Predict GO terms from Neighborhoods
MF GO:0070628 proteasome binding IEP Predict GO terms from Neighborhoods
BP GO:0070848 response to growth factor IEP Predict GO terms from Neighborhoods
BP GO:0070936 protein K48-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0070979 protein K11-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0071215 cellular response to abscisic acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071310 cellular response to organic substance IEP Predict GO terms from Neighborhoods
BP GO:0071363 cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071446 cellular response to salicylic acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071629 cytoplasm protein quality control by the ubiquitin-proteasome system IEP Predict GO terms from Neighborhoods
BP GO:0072009 nephron epithelium development IEP Predict GO terms from Neighborhoods
BP GO:0072073 kidney epithelium development IEP Predict GO terms from Neighborhoods
BP GO:0072080 nephron tubule development IEP Predict GO terms from Neighborhoods
BP GO:0072344 rescue of stalled ribosome IEP Predict GO terms from Neighborhoods
BP GO:0072671 mitochondria-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0085020 protein K6-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0090068 positive regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0090092 regulation of transmembrane receptor protein serine/threonine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090100 positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0090287 regulation of cellular response to growth factor stimulus IEP Predict GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Predict GO terms from Neighborhoods
BP GO:0097306 cellular response to alcohol IEP Predict GO terms from Neighborhoods
MF GO:0097718 disordered domain specific binding IEP Predict GO terms from Neighborhoods
BP GO:0098581 detection of external biotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0098586 cellular response to virus IEP Predict GO terms from Neighborhoods
BP GO:0099120 socially cooperative development IEP Predict GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Predict GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
BP GO:0140455 cytoplasm protein quality control IEP Predict GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1900087 positive regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:1901222 regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1901224 positive regulation of NIK/NF-kappaB signaling IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901700 response to oxygen-containing compound IEP Predict GO terms from Neighborhoods
BP GO:1901989 positive regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901992 positive regulation of mitotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
CC GO:1902493 acetyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
BP GO:1902806 regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902808 positive regulation of cell cycle G1/S phase transition IEP Predict GO terms from Neighborhoods
BP GO:1903844 regulation of cellular response to transforming growth factor beta stimulus IEP Predict GO terms from Neighborhoods
BP GO:1903846 positive regulation of cellular response to transforming growth factor beta stimulus IEP Predict GO terms from Neighborhoods
BP GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Predict GO terms from Neighborhoods
BP GO:1990258 histone glutamine methylation IEP Predict GO terms from Neighborhoods
BP GO:2000045 regulation of G1/S transition of mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:2000278 regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000573 positive regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001810 F-box_dom 46 89
IPR036047 F-box-like_dom_sf 43 103
IPR043129 ATPase_NBD 251 459
IPR004000 Actin 210 463
IPR043129 ATPase_NBD 136 257
No external refs found!