SOLTUB.AGRIA.G00000026730

Description : root UVB sensitive-like protein (Protein of unknown function, DUF647)

Gene families : OG_02_0004029 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026730
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_251

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0010224	response to UV-B	IEA	AHRD
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0031969	chloroplast membrane	IEA	AHRD
BP	GO:0032502	developmental process	IEA	AHRD
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0000307	cyclin-dependent protein kinase holoenzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000439	transcription factor TFIIH core complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0001650	fibrillar center	IEP	Predict GO terms from Neighborhoods
CC	GO:0001750	photoreceptor outer segment	IEP	Predict GO terms from Neighborhoods
CC	GO:0001917	photoreceptor inner segment	IEP	Predict GO terms from Neighborhoods
MF	GO:0003713	transcription coactivator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004659	prenyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004661	protein geranylgeranyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004662	CAAX-protein geranylgeranyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004663	Rab geranylgeranyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004707	MAP kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005813	centrosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005819	spindle	IEP	Predict GO terms from Neighborhoods
CC	GO:0005929	cilium	IEP	Predict GO terms from Neighborhoods
CC	GO:0005930	axoneme	IEP	Predict GO terms from Neighborhoods
CC	GO:0005968	Rab-protein geranylgeranyltransferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006352	DNA-templated transcription initiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006367	transcription initiation at RNA polymerase II promoter	IEP	Predict GO terms from Neighborhoods
BP	GO:0007018	microtubule-based movement	IEP	Predict GO terms from Neighborhoods
BP	GO:0007276	gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0007283	spermatogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007600	sensory perception	IEP	Predict GO terms from Neighborhoods
BP	GO:0007601	visual perception	IEP	Predict GO terms from Neighborhoods
MF	GO:0008022	protein C-terminus binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	Predict GO terms from Neighborhoods
MF	GO:0008318	protein prenyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010393	galacturonan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010638	positive regulation of organelle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010639	negative regulation of organelle organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010970	transport along microtubule	IEP	Predict GO terms from Neighborhoods
MF	GO:0016740	transferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Predict GO terms from Neighborhoods
BP	GO:0018342	protein prenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018344	protein geranylgeranylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0019840	isoprenoid binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0019907	cyclin-dependent protein kinase activating kinase holoenzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0019908	nuclear cyclin-dependent protein kinase holoenzyme complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030424	axon	IEP	Predict GO terms from Neighborhoods
CC	GO:0030425	dendrite	IEP	Predict GO terms from Neighborhoods
CC	GO:0030496	midbody	IEP	Predict GO terms from Neighborhoods
BP	GO:0030705	cytoskeleton-dependent intracellular transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0031267	small GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0031344	regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031345	negative regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031346	positive regulation of cell projection organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0031503	protein-containing complex localization	IEP	Predict GO terms from Neighborhoods
CC	GO:0031514	motile cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0031647	regulation of protein stability	IEP	Predict GO terms from Neighborhoods
CC	GO:0032391	photoreceptor connecting cilium	IEP	Predict GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0032806	carboxy-terminal domain protein kinase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0035720	intraciliary anterograde transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0035721	intraciliary retrograde transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0035869	ciliary transition zone	IEP	Predict GO terms from Neighborhoods
CC	GO:0036064	ciliary basal body	IEP	Predict GO terms from Neighborhoods
BP	GO:0042073	intraciliary transport	IEP	Predict GO terms from Neighborhoods
CC	GO:0043025	neuronal cell body	IEP	Predict GO terms from Neighborhoods
BP	GO:0044089	positive regulation of cellular component biogenesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0044297	cell body	IEP	Predict GO terms from Neighborhoods
BP	GO:0045488	pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045494	photoreceptor cell maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0045724	positive regulation of cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0048232	male gamete generation	IEP	Predict GO terms from Neighborhoods
BP	GO:0050821	protein stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050877	nervous system process	IEP	Predict GO terms from Neighborhoods
BP	GO:0050953	sensory perception of light stimulus	IEP	Predict GO terms from Neighborhoods
MF	GO:0051020	GTPase binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0052546	cell wall pectin metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0060491	regulation of cell projection assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Predict GO terms from Neighborhoods
CC	GO:0070516	CAK-ERCC2 complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0070985	transcription factor TFIIK complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0072686	mitotic spindle	IEP	Predict GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0097354	prenylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0097472	cyclin-dependent protein kinase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0097542	ciliary tip	IEP	Predict GO terms from Neighborhoods
CC	GO:0097546	ciliary base	IEP	Predict GO terms from Neighborhoods
BP	GO:0099111	microtubule-based transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0120032	regulation of plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120033	negative regulation of plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120034	positive regulation of plasma membrane bounded cell projection assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0120035	regulation of plasma membrane bounded cell projection organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Predict GO terms from Neighborhoods
CC	GO:0150005	enzyme activator complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1902017	regulation of cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902018	negative regulation of cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902115	regulation of organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902116	negative regulation of organelle assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902117	positive regulation of organelle assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1902554	serine/threonine protein kinase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1902855	regulation of non-motile cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902856	negative regulation of non-motile cilium assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1902857	positive regulation of non-motile cilium assembly	IEP	Predict GO terms from Neighborhoods
CC	GO:1902911	protein kinase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1990234	transferase complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006968	RUS_fam	197	425

External Links

No external refs found!

SOLTUB.AGRIA.G00000026730

Expression Profile

Co-expression Networks

Functional Annotation