Description : F-box/RNI-like superfamily protein
Gene families : OG_02_0007364 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000036084 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_261 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000018 | regulation of DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000075 | cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000077 | DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000217 | DNA secondary structure binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000228 | nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000403 | Y-form DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000722 | telomere maintenance via recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000723 | telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000725 | recombinational repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000729 | DNA double-strand break processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000731 | DNA synthesis involved in DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000732 | strand displacement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002097 | tRNA wobble base modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003678 | DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003730 | mRNA 3'-UTR binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004386 | helicase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006268 | DNA unwinding involved in DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006275 | regulation of DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006282 | regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006301 | postreplication repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006302 | double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006310 | DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006312 | mitotic recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006378 | mRNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006379 | mRNA cleavage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006400 | tRNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007093 | mitotic cell cycle checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007281 | germ cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007292 | female gamete generation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007534 | gene conversion at mating-type locus | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008033 | tRNA processing | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0009295 | nucleoid | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0009378 | four-way junction helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009737 | response to abscisic acid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009744 | response to sucrose | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010212 | response to ionizing radiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010389 | regulation of G2/M transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010520 | regulation of reciprocal meiotic recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010928 | regulation of auxin mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010946 | regulation of meiotic joint molecule formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010947 | negative regulation of meiotic joint molecule formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010948 | negative regulation of cell cycle process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010972 | negative regulation of G2/M transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016073 | snRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016180 | snRNA processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017069 | snRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017070 | U6 snRNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017116 | single-stranded DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0017117 | single-stranded DNA-dependent ATP-dependent DNA helicase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0017148 | negative regulation of translation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0022616 | DNA strand elongation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030894 | replisome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031123 | RNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031124 | mRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031422 | RecQ family helicase-topoisomerase III complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031537 | regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031538 | negative regulation of anthocyanin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031570 | DNA integrity checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031573 | mitotic intra-S DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031860 | telomeric 3' overhang formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032104 | regulation of response to extracellular stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032107 | regulation of response to nutrient levels | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032200 | telomere organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032392 | DNA geometric change | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032508 | DNA duplex unwinding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032993 | protein-DNA complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033202 | DNA helicase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034249 | negative regulation of cellular amide metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034285 | response to disaccharide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034472 | snRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034477 | U6 snRNA 3'-end processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034644 | cellular response to UV | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035822 | gene conversion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035825 | homologous recombination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035861 | site of double-strand break | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036310 | ATP-dependent DNA/DNA annealing activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042631 | cellular response to water deprivation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042770 | signal transduction in response to DNA damage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043007 | maintenance of rDNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043138 | 3'-5' DNA helicase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043487 | regulation of RNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043488 | regulation of mRNA stability | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043570 | maintenance of DNA repeat elements | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043590 | bacterial nucleoid | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043609 | regulation of carbon utilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043631 | RNA polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044773 | mitotic DNA damage checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044774 | mitotic DNA integrity checkpoint signaling | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044815 | DNA packaging complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044818 | mitotic G2/M transition checkpoint | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045003 | double-strand break repair via synthesis-dependent strand annealing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045738 | negative regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045930 | negative regulation of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048477 | oogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048519 | negative regulation of biological process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0050265 | RNA uridylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050779 | RNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051304 | chromosome separation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051307 | meiotic chromosome separation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051880 | G-quadruplex DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060147 | regulation of post-transcriptional gene silencing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060966 | regulation of gene silencing by RNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061013 | regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061014 | positive regulation of mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061157 | mRNA destabilization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070417 | cellular response to cold | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070566 | adenylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070569 | uridylyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070914 | UV-damage excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071103 | DNA conformation change | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071139 | resolution of recombination intermediates | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071140 | resolution of mitotic recombination intermediates | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071215 | cellular response to abscisic acid stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071229 | cellular response to acid chemical | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071310 | cellular response to organic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071322 | cellular response to carbohydrate stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071324 | cellular response to disaccharide stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071329 | cellular response to sucrose stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071462 | cellular response to water stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071897 | DNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090329 | regulation of DNA-templated DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090734 | site of DNA damage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097305 | response to alcohol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097306 | cellular response to alcohol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098787 | mRNA cleavage involved in mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098789 | pre-mRNA cleavage required for polyadenylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120291 | negative regulation of mitotic recombination-dependent replication fork processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140666 | annealing activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901291 | negative regulation of double-strand break repair via single-strand annealing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901701 | cellular response to oxygen-containing compound | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901988 | negative regulation of cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901991 | negative regulation of mitotic cell cycle phase transition | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902749 | regulation of cell cycle G2/M phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902750 | negative regulation of cell cycle G2/M phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903221 | regulation of mitotic recombination-dependent replication fork processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903313 | positive regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990074 | polyuridylation-dependent mRNA catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990814 | DNA/DNA annealing activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990918 | double-strand break repair involved in meiotic recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000024 | regulation of leaf development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000113 | negative regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000779 | regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000780 | negative regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001020 | regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001021 | negative regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |