SOLTUB.AGRIA.G00000038352


Description : Thymidine kinase


Gene families : OG_02_0002714 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038352
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_181


Type GO Term Name Evidence Source
MF GO:0004683 calmodulin-dependent protein kinase activity IEA AHRD
MF GO:0004797 thymidine kinase activity IEA AHRD
MF GO:0005516 calmodulin binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006302 double-strand break repair IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEA AHRD
BP GO:0009409 response to cold IEA AHRD
CC GO:0009507 chloroplast IEA AHRD
BP GO:0010225 response to UV-C IEA AHRD
BP GO:0016310 phosphorylation IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0046104 thymidine metabolic process IEA AHRD
BP GO:0051289 protein homotetramerization IEA AHRD
BP GO:0071897 DNA biosynthetic process IEA AHRD
BP GO:0090351 seedling development IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000018 regulation of DNA recombination IEP Predict GO terms from Neighborhoods
MF GO:0000150 DNA strand exchange activity IEP Predict GO terms from Neighborhoods
BP GO:0000278 mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0000280 nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0000708 meiotic strand invasion IEP Predict GO terms from Neighborhoods
BP GO:0000709 meiotic joint molecule formation IEP Predict GO terms from Neighborhoods
BP GO:0000722 telomere maintenance via recombination IEP Predict GO terms from Neighborhoods
BP GO:0000723 telomere maintenance IEP Predict GO terms from Neighborhoods
BP GO:0000724 double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0000725 recombinational repair IEP Predict GO terms from Neighborhoods
BP GO:0000730 DNA recombinase assembly IEP Predict GO terms from Neighborhoods
CC GO:0000775 chromosome, centromeric region IEP Predict GO terms from Neighborhoods
CC GO:0000781 chromosome, telomeric region IEP Predict GO terms from Neighborhoods
CC GO:0000800 lateral element IEP Predict GO terms from Neighborhoods
BP GO:0001709 cell fate determination IEP Predict GO terms from Neighborhoods
BP GO:0001824 blastocyst development IEP Predict GO terms from Neighborhoods
BP GO:0002765 immune response-inhibiting signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0002767 immune response-inhibiting cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002768 immune response-regulating cell surface receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0002769 natural killer cell inhibitory signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003713 transcription coactivator activity IEP Predict GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Predict GO terms from Neighborhoods
CC GO:0005635 nuclear envelope IEP Predict GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Predict GO terms from Neighborhoods
CC GO:0005971 ribonucleoside-diphosphate reductase complex IEP Predict GO terms from Neighborhoods
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006268 DNA unwinding involved in DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006275 regulation of DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006282 regulation of DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006310 DNA recombination IEP Predict GO terms from Neighborhoods
BP GO:0006312 mitotic recombination IEP Predict GO terms from Neighborhoods
BP GO:0006403 RNA localization IEP Predict GO terms from Neighborhoods
BP GO:0007130 synaptonemal complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0007143 female meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007294 germarium-derived oocyte fate determination IEP Predict GO terms from Neighborhoods
BP GO:0007530 sex determination IEP Predict GO terms from Neighborhoods
BP GO:0007531 mating type determination IEP Predict GO terms from Neighborhoods
BP GO:0007533 mating type switching IEP Predict GO terms from Neighborhoods
MF GO:0008022 protein C-terminus binding IEP Predict GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Predict GO terms from Neighborhoods
BP GO:0008156 negative regulation of DNA replication IEP Predict GO terms from Neighborhoods
MF GO:0008199 ferric iron binding IEP Predict GO terms from Neighborhoods
BP GO:0008298 intracellular mRNA localization IEP Predict GO terms from Neighborhoods
BP GO:0009112 nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009263 deoxyribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009636 response to toxic substance IEP Predict GO terms from Neighborhoods
CC GO:0009897 external side of plasma membrane IEP Predict GO terms from Neighborhoods
BP GO:0009949 polarity specification of anterior/posterior axis IEP Predict GO terms from Neighborhoods
BP GO:0009951 polarity specification of dorsal/ventral axis IEP Predict GO terms from Neighborhoods
BP GO:0010165 response to X-ray IEP Predict GO terms from Neighborhoods
BP GO:0010212 response to ionizing radiation IEP Predict GO terms from Neighborhoods
BP GO:0010332 response to gamma radiation IEP Predict GO terms from Neighborhoods
BP GO:0010469 regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:0010569 regulation of double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010833 telomere maintenance via telomere lengthening IEP Predict GO terms from Neighborhoods
CC GO:0016605 PML body IEP Predict GO terms from Neighborhoods
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Predict GO terms from Neighborhoods
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016922 nuclear receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0017116 single-stranded DNA helicase activity IEP Predict GO terms from Neighborhoods
MF GO:0019902 phosphatase binding IEP Predict GO terms from Neighborhoods
MF GO:0019903 protein phosphatase binding IEP Predict GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0022413 reproductive process in single-celled organism IEP Predict GO terms from Neighborhoods
MF GO:0030331 nuclear estrogen receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0030374 nuclear receptor coactivator activity IEP Predict GO terms from Neighborhoods
BP GO:0030491 heteroduplex formation IEP Predict GO terms from Neighborhoods
BP GO:0030716 oocyte fate determination IEP Predict GO terms from Neighborhoods
BP GO:0030717 oocyte karyosome formation IEP Predict GO terms from Neighborhoods
BP GO:0031288 sorocarp morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0031297 replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032042 mitochondrial DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032200 telomere organization IEP Predict GO terms from Neighborhoods
BP GO:0032392 DNA geometric change IEP Predict GO terms from Neighborhoods
BP GO:0032508 DNA duplex unwinding IEP Predict GO terms from Neighborhoods
MF GO:0035259 nuclear glucocorticoid receptor binding IEP Predict GO terms from Neighborhoods
CC GO:0035861 site of double-strand break IEP Predict GO terms from Neighborhoods
BP GO:0036297 interstrand cross-link repair IEP Predict GO terms from Neighborhoods
BP GO:0042148 strand invasion IEP Predict GO terms from Neighborhoods
BP GO:0043279 response to alkaloid IEP Predict GO terms from Neighborhoods
BP GO:0043504 mitochondrial DNA repair IEP Predict GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Predict GO terms from Neighborhoods
BP GO:0045005 DNA-templated DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
BP GO:0045165 cell fate commitment IEP Predict GO terms from Neighborhoods
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046966 nuclear thyroid hormone receptor binding IEP Predict GO terms from Neighborhoods
BP GO:0048285 organelle fission IEP Predict GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Predict GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Predict GO terms from Neighborhoods
MF GO:0050681 nuclear androgen receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0050692 DNA binding domain binding IEP Predict GO terms from Neighborhoods
BP GO:0051026 chiasma assembly IEP Predict GO terms from Neighborhoods
BP GO:0051053 negative regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051054 positive regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051105 regulation of DNA ligation IEP Predict GO terms from Neighborhoods
BP GO:0051106 positive regulation of DNA ligation IEP Predict GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051290 protein heterotetramerization IEP Predict GO terms from Neighborhoods
BP GO:0051291 protein heterooligomerization IEP Predict GO terms from Neighborhoods
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0061982 meiosis I cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0061988 karyosome formation IEP Predict GO terms from Neighborhoods
BP GO:0065001 specification of axis polarity IEP Predict GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Predict GO terms from Neighborhoods
MF GO:0070182 DNA polymerase binding IEP Predict GO terms from Neighborhoods
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0070193 synaptonemal complex organization IEP Predict GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Predict GO terms from Neighborhoods
BP GO:0071241 cellular response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0071312 cellular response to alkaloid IEP Predict GO terms from Neighborhoods
BP GO:0071407 cellular response to organic cyclic compound IEP Predict GO terms from Neighborhoods
BP GO:0071417 cellular response to organonitrogen compound IEP Predict GO terms from Neighborhoods
BP GO:0071479 cellular response to ionizing radiation IEP Predict GO terms from Neighborhoods
BP GO:0071480 cellular response to gamma radiation IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0072710 response to hydroxyurea IEP Predict GO terms from Neighborhoods
BP GO:0072711 cellular response to hydroxyurea IEP Predict GO terms from Neighborhoods
BP GO:0072718 response to cisplatin IEP Predict GO terms from Neighborhoods
BP GO:0072719 cellular response to cisplatin IEP Predict GO terms from Neighborhoods
BP GO:0072757 cellular response to camptothecin IEP Predict GO terms from Neighborhoods
BP GO:0090329 regulation of DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
CC GO:0090734 site of DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0090735 DNA repair complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0097306 cellular response to alcohol IEP Predict GO terms from Neighborhoods
CC GO:0098552 side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098687 chromosomal region IEP Predict GO terms from Neighborhoods
BP GO:0110026 regulation of DNA strand resection involved in replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:0110027 negative regulation of DNA strand resection involved in replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:0120290 stalled replication fork localization to nuclear periphery IEP Predict GO terms from Neighborhoods
BP GO:0140013 meiotic nuclear division IEP Predict GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Predict GO terms from Neighborhoods
MF GO:0140297 DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:1901563 response to camptothecin IEP Predict GO terms from Neighborhoods
BP GO:1902298 cell cycle DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
BP GO:1903046 meiotic cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:1903416 response to glycoside IEP Predict GO terms from Neighborhoods
BP GO:1904631 response to glucoside IEP Predict GO terms from Neighborhoods
MF GO:1905334 Swi5-Sfr1 complex binding IEP Predict GO terms from Neighborhoods
CC GO:1990204 oxidoreductase complex IEP Predict GO terms from Neighborhoods
BP GO:1990414 replication-born double-strand break repair via sister chromatid exchange IEP Predict GO terms from Neighborhoods
BP GO:1990426 mitotic recombination-dependent replication fork processing IEP Predict GO terms from Neighborhoods
BP GO:1990505 mitotic DNA replication maintenance of fidelity IEP Predict GO terms from Neighborhoods
BP GO:1990918 double-strand break repair involved in meiotic recombination IEP Predict GO terms from Neighborhoods
BP GO:2000104 negative regulation of DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:2000272 negative regulation of signaling receptor activity IEP Predict GO terms from Neighborhoods
BP GO:2000779 regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR001267 Thymidine_kinase 25 202
IPR027417 P-loop_NTPase 24 163
No external refs found!