SOLTUB.AGRIA.G00000038898

Description : Cysteine proteinases superfamily protein

Gene families : OG_02_0005099 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000038898
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_175

Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003711	transcription elongation factor activity	IEA	AHRD
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	IEA	AHRD
MF	GO:0004197	cysteine-type endopeptidase activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	AHRD
CC	GO:0005654	nucleoplasm	IEA	AHRD
CC	GO:0005737	cytoplasm	IEA	AHRD
CC	GO:0005925	focal adhesion	IEA	AHRD
BP	GO:0006276	plasmid maintenance	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	IEA	AHRD
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006508	proteolysis	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006919	activation of cysteine-type endopeptidase activity involved in apoptotic process	IEA	AHRD
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007088	regulation of mitotic nuclear division	None	Extended
BP	GO:0007093	mitotic cell cycle checkpoint signaling	None	Extended
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	IEA	AHRD
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007346	regulation of mitotic cell cycle	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	IEA	AHRD
MF	GO:0008234	cysteine-type peptidase activity	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009895	negative regulation of catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010639	negative regulation of organelle organization	None	Extended
BP	GO:0010724	regulation of definitive erythrocyte differentiation	IEA	AHRD
BP	GO:0010948	negative regulation of cell cycle process	None	Extended
BP	GO:0010950	positive regulation of endopeptidase activity	None	Extended
BP	GO:0010952	positive regulation of peptidase activity	None	Extended
BP	GO:0010965	regulation of mitotic sister chromatid separation	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	IEA	AHRD
BP	GO:0016926	protein desumoylation	IEA	AHRD
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030055	cell-substrate junction	None	Extended
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	None	Extended
BP	GO:0030162	regulation of proteolysis	None	Extended
BP	GO:0030261	chromosome condensation	IEA	AHRD
CC	GO:0031090	organelle membrane	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031330	negative regulation of cellular catabolic process	None	Extended
BP	GO:0031577	spindle checkpoint signaling	None	Extended
CC	GO:0031965	nuclear membrane	IEA	AHRD
BP	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	IEA	AHRD
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	None	Extended
BP	GO:0033045	regulation of sister chromatid segregation	None	Extended
BP	GO:0033046	negative regulation of sister chromatid segregation	None	Extended
BP	GO:0033047	regulation of mitotic sister chromatid segregation	None	Extended
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0042176	regulation of protein catabolic process	None	Extended
BP	GO:0042177	negative regulation of protein catabolic process	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043280	positive regulation of cysteine-type endopeptidase activity involved in apoptotic process	None	Extended
BP	GO:0043281	regulation of cysteine-type endopeptidase activity involved in apoptotic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045637	regulation of myeloid cell differentiation	None	Extended
BP	GO:0045646	regulation of erythrocyte differentiation	None	Extended
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045839	negative regulation of mitotic nuclear division	None	Extended
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	None	Extended
BP	GO:0045861	negative regulation of proteolysis	None	Extended
BP	GO:0045862	positive regulation of proteolysis	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	None	Extended
BP	GO:0045930	negative regulation of mitotic cell cycle	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051129	negative regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051336	regulation of hydrolase activity	None	Extended
BP	GO:0051345	positive regulation of hydrolase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0051783	regulation of nuclear division	None	Extended
BP	GO:0051784	negative regulation of nuclear division	None	Extended
BP	GO:0051983	regulation of chromosome segregation	None	Extended
BP	GO:0051985	negative regulation of chromosome segregation	None	Extended
BP	GO:0052547	regulation of peptidase activity	None	Extended
BP	GO:0052548	regulation of endopeptidase activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0061136	regulation of proteasomal protein catabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
MF	GO:0070137	ubiquitin-like protein-specific endopeptidase activity	None	Extended
MF	GO:0070139	SUMO-specific endopeptidase activity	IEA	AHRD
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071173	spindle assembly checkpoint signaling	None	Extended
BP	GO:0071174	mitotic spindle checkpoint signaling	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0097190	apoptotic signaling pathway	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901799	negative regulation of proteasomal protein catabolic process	None	Extended
BP	GO:1901987	regulation of cell cycle phase transition	None	Extended
BP	GO:1901988	negative regulation of cell cycle phase transition	None	Extended
BP	GO:1901990	regulation of mitotic cell cycle phase transition	None	Extended
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	None	Extended
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	None	Extended
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1903050	regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:1903051	negative regulation of proteolysis involved in protein catabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903706	regulation of hemopoiesis	None	Extended
BP	GO:1905818	regulation of chromosome separation	None	Extended
BP	GO:1905819	negative regulation of chromosome separation	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000058	regulation of ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:2000059	negative regulation of ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:2000116	regulation of cysteine-type endopeptidase activity	None	Extended
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	None	Extended
BP	GO:2001056	positive regulation of cysteine-type endopeptidase activity	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended
BP	GO:2001251	negative regulation of chromosome organization	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000123	histone acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000124	SAGA complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0000421	autophagosome membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0003713	transcription coactivator activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005669	transcription factor TFIID complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0006473	protein acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006475	internal protein amino acid acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006906	vesicle fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0006914	autophagy	IEP	Predict GO terms from Neighborhoods
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010104	regulation of ethylene-activated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Predict GO terms from Neighborhoods
MF	GO:0010314	phosphatidylinositol-5-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0016050	vesicle organization	IEP	Predict GO terms from Neighborhoods
MF	GO:0016251	RNA polymerase II general transcription initiation factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016573	histone acetylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0017025	TBP-class protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0018393	internal peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018394	peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0022411	cellular component disassembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0031248	protein acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0032266	phosphatidylinositol-3-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032881	regulation of polysaccharide metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0032984	protein-containing complex disassembly	IEP	Predict GO terms from Neighborhoods
CC	GO:0033276	transcription factor TFTC complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Predict GO terms from Neighborhoods
BP	GO:0043543	protein acylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043933	protein-containing complex organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0043966	histone H3 acetylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0046695	SLIK (SAGA-like) complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0046982	protein heterodimerization activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0048284	organelle fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0051090	regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051091	positive regulation of DNA-binding transcription factor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051123	RNA polymerase II preinitiation complex assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0060090	molecular adaptor activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0061025	membrane fusion	IEP	Predict GO terms from Neighborhoods
MF	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0061909	autophagosome-lysosome fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0061910	autophagosome-endosome fusion	IEP	Predict GO terms from Neighborhoods
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predict GO terms from Neighborhoods
BP	GO:0065004	protein-DNA complex assembly	IEP	Predict GO terms from Neighborhoods
MF	GO:0070273	phosphatidylinositol-4-phosphate binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0070297	regulation of phosphorelay signal transduction system	IEP	Predict GO terms from Neighborhoods
CC	GO:0070461	SAGA-type complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0070873	regulation of glycogen metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070897	transcription preinitiation complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0090174	organelle membrane fusion	IEP	Predict GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0097352	autophagosome maturation	IEP	Predict GO terms from Neighborhoods
MF	GO:0140223	general transcription initiation factor activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0140296	general transcription initiation factor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	Predict GO terms from Neighborhoods
CC	GO:1902493	acetyltransferase complex	IEP	Predict GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR038765	Papain-like_cys_pep_sf	111	250
IPR003653	Peptidase_C48_C	145	251

External Links

No external refs found!

SOLTUB.AGRIA.G00000038898

Expression Profile

Co-expression Networks

Functional Annotation