SOLTUB.AGRIA.G00000039475


Description : RING-box protein


Gene families : OG_02_0023527 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000039475
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_818


Type GO Term Name Evidence Source
BP GO:0000082 G1/S transition of mitotic cell cycle IEA AHRD
BP GO:0000165 MAPK cascade IEA AHRD
BP GO:0000302 response to reactive oxygen species IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005680 anaphase-promoting complex IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0006281 DNA repair IEA AHRD
BP GO:0006513 protein monoubiquitination IEA AHRD
BP GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process IEA AHRD
MF GO:0008134 transcription factor binding IEA AHRD
MF GO:0008190 eukaryotic initiation factor 4E binding IEA AHRD
MF GO:0008270 zinc ion binding IEA AHRD
BP GO:0008283 cell population proliferation IEA AHRD
BP GO:0008595 anterior/posterior axis specification, embryo IEA AHRD
BP GO:0008631 intrinsic apoptotic signaling pathway in response to oxidative stress IEA AHRD
BP GO:0008637 apoptotic mitochondrial changes IEA AHRD
BP GO:0016032 viral process IEA AHRD
BP GO:0019915 lipid storage IEA AHRD
BP GO:0021799 cerebral cortex radially oriented cell migration IEA AHRD
BP GO:0021942 radial glia guided migration of Purkinje cell IEA AHRD
MF GO:0030674 protein-macromolecule adaptor activity IEA AHRD
CC GO:0030891 VCB complex IEA AHRD
BP GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA AHRD
CC GO:0031462 Cul2-RING ubiquitin ligase complex IEA AHRD
CC GO:0031463 Cul3-RING ubiquitin ligase complex IEA AHRD
CC GO:0031464 Cul4A-RING E3 ubiquitin ligase complex IEA AHRD
CC GO:0031465 Cul4B-RING E3 ubiquitin ligase complex IEA AHRD
CC GO:0031466 Cul5-RING ubiquitin ligase complex IEA AHRD
CC GO:0031467 Cul7-RING ubiquitin ligase complex IEA AHRD
MF GO:0031625 ubiquitin protein ligase binding IEA AHRD
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA AHRD
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEA AHRD
CC GO:0035361 Cul8-RING ubiquitin ligase complex IEA AHRD
CC GO:0043224 nuclear SCF ubiquitin ligase complex IEA AHRD
BP GO:0043518 negative regulation of DNA damage response, signal transduction by p53 class mediator IEA AHRD
BP GO:0043687 post-translational protein modification IEA AHRD
MF GO:0044877 protein-containing complex binding IEA AHRD
BP GO:0045116 protein neddylation IEA AHRD
BP GO:0045879 negative regulation of smoothened signaling pathway IEA AHRD
BP GO:0046627 negative regulation of insulin receptor signaling pathway IEA AHRD
BP GO:0051759 sister chromosome movement towards spindle pole involved in meiotic sister chromatid segregation IEA AHRD
MF GO:0061663 NEDD8 ligase activity IEA AHRD
BP GO:0070936 protein K48-linked ubiquitination IEA AHRD
BP GO:0090090 negative regulation of canonical Wnt signaling pathway IEA AHRD
MF GO:0097602 cullin family protein binding IEA AHRD
BP GO:1902104 positive regulation of metaphase/anaphase transition of meiotic cell cycle IEA AHRD
BP GO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage IEA AHRD
BP GO:1902499 positive regulation of protein autoubiquitination IEA AHRD
BP GO:1904801 positive regulation of neuron remodeling IEA AHRD
Type GO Term Name Evidence Source
CC GO:0000932 P-body IEP Predict GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Predict GO terms from Neighborhoods
MF GO:0003713 transcription coactivator activity IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0007519 skeletal muscle tissue development IEP Predict GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0009889 regulation of biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010468 regulation of gene expression IEP Predict GO terms from Neighborhoods
BP GO:0010499 proteasomal ubiquitin-independent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0016363 nuclear matrix IEP Predict GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predict GO terms from Neighborhoods
CC GO:0022626 cytosolic ribosome IEP Predict GO terms from Neighborhoods
CC GO:0030017 sarcomere IEP Predict GO terms from Neighborhoods
BP GO:0031326 regulation of cellular biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0034515 proteasome storage granule IEP Predict GO terms from Neighborhoods
BP GO:0035196 miRNA processing IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
CC GO:0042788 polysomal ribosome IEP Predict GO terms from Neighborhoods
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
MF GO:0051059 NF-kappaB binding IEP Predict GO terms from Neighborhoods
BP GO:0051090 regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051091 positive regulation of DNA-binding transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051092 positive regulation of NF-kappaB transcription factor activity IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0060537 muscle tissue development IEP Predict GO terms from Neighborhoods
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0070918 small regulatory ncRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0140297 DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:1900150 regulation of defense response to fungus IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:2000031 regulation of salicylic acid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR024991 RING-H2_APC11 30 67
No external refs found!