1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000041800

SOLTUB.AGRIA.G00000041800


Description : Bifunctional nuclease 1


Gene families : OG_02_0011457 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000041800
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_122


Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA AHRD
CC GO:0005634 nucleus IEA AHRD
BP GO:0016567 protein ubiquitination IEA AHRD
CC GO:0030891 VCB complex IEA AHRD
BP GO:0050832 defense response to fungus IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0000024 maltose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0000272 polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0000323 lytic vacuole IEP Predict GO terms from Neighborhoods
BP GO:0000373 Group II intron splicing IEP Predict GO terms from Neighborhoods
BP GO:0000460 maturation of 5.8S rRNA IEP Predict GO terms from Neighborhoods
CC GO:0001520 outer dense fiber IEP Predict GO terms from Neighborhoods
BP GO:0001656 metanephros development IEP Predict GO terms from Neighborhoods
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
CC GO:0001669 acrosomal vesicle IEP Predict GO terms from Neighborhoods
BP GO:0001909 leukocyte mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0001913 T cell mediated cytotoxicity IEP Predict GO terms from Neighborhoods
BP GO:0002213 defense response to insect IEP Predict GO terms from Neighborhoods
BP GO:0002250 adaptive immune response IEP Predict GO terms from Neighborhoods
BP GO:0002443 leukocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002449 lymphocyte mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002456 T cell mediated immunity IEP Predict GO terms from Neighborhoods
BP GO:0002460 adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains IEP Predict GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004177 aminopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004311 farnesyltranstransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004337 geranyltranstransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004497 monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
MF GO:0004723 calcium-dependent protein serine/threonine phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0005513 detection of calcium ion IEP Predict GO terms from Neighborhoods
CC GO:0005615 extracellular space IEP Predict GO terms from Neighborhoods
CC GO:0005764 lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005767 secondary lysosome IEP Predict GO terms from Neighborhoods
CC GO:0005930 axoneme IEP Predict GO terms from Neighborhoods
CC GO:0005955 calcineurin complex IEP Predict GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005982 starch metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005983 starch catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0005984 disaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006073 cellular glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006629 lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006720 isoprenoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006971 hypotonic response IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
BP GO:0008299 isoprenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0008610 lipid biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0008656 cysteine-type endopeptidase activator activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009251 glucan catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009311 oligosaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009312 oligosaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009528 plastid inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0009532 plastid stroma IEP Predict GO terms from Neighborhoods
CC GO:0009570 chloroplast stroma IEP Predict GO terms from Neighborhoods
CC GO:0009575 chromoplast stroma IEP Predict GO terms from Neighborhoods
BP GO:0009617 response to bacterium IEP Predict GO terms from Neighborhoods
BP GO:0009698 phenylpropanoid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009699 phenylpropanoid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009706 chloroplast inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0009804 coumarin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009805 coumarin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009820 alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009821 alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009908 flower development IEP Predict GO terms from Neighborhoods
BP GO:0009953 dorsal/ventral pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010038 response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0010039 response to iron ion IEP Predict GO terms from Neighborhoods
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predict GO terms from Neighborhoods
BP GO:0010446 response to alkaline pH IEP Predict GO terms from Neighborhoods
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
BP GO:0010813 neuropeptide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010815 bradykinin catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0015020 glucuronosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0015996 chlorophyll catabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016073 snRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016109 tetraterpenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016117 carotenoid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0016119 carotene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016120 carotene biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Predict GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Predict GO terms from Neighborhoods
BP GO:0016180 snRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016504 peptidase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0016505 peptidase activator activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predict GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predict GO terms from Neighborhoods
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predict GO terms from Neighborhoods
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Predict GO terms from Neighborhoods
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predict GO terms from Neighborhoods
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Predict GO terms from Neighborhoods
MF GO:0016767 geranylgeranyl-diphosphate geranylgeranyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0019866 organelle inner membrane IEP Predict GO terms from Neighborhoods
BP GO:0019882 antigen processing and presentation IEP Predict GO terms from Neighborhoods
MF GO:0030108 HLA-A specific activating MHC class I receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0030984 kininogen binding IEP Predict GO terms from Neighborhoods
BP GO:0031125 rRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0031638 zymogen activation IEP Predict GO terms from Neighborhoods
CC GO:0031969 chloroplast membrane IEP Predict GO terms from Neighborhoods
CC GO:0032010 phagolysosome IEP Predict GO terms from Neighborhoods
MF GO:0032393 MHC class I receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0032397 activating MHC class I receptor activity IEP Predict GO terms from Neighborhoods
MF GO:0032441 pheophorbide a oxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0032526 response to retinoic acid IEP Predict GO terms from Neighborhoods
CC GO:0032578 aleurone grain membrane IEP Predict GO terms from Neighborhoods
BP GO:0032780 negative regulation of ATP-dependent activity IEP Predict GO terms from Neighborhoods
BP GO:0033015 tetrapyrrole catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033075 isoquinoline alkaloid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0033076 isoquinoline alkaloid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0033619 membrane protein proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0034389 lipid droplet organization IEP Predict GO terms from Neighborhoods
BP GO:0034472 snRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0035770 ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
CC GO:0036019 endolysosome IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0036294 cellular response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP Predict GO terms from Neighborhoods
CC GO:0042170 plastid membrane IEP Predict GO terms from Neighborhoods
BP GO:0042214 terpene metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042440 pigment metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042539 hypotonic salinity response IEP Predict GO terms from Neighborhoods
CC GO:0042599 lamellar body IEP Predict GO terms from Neighborhoods
CC GO:0042718 yolk granule IEP Predict GO terms from Neighborhoods
MF GO:0043028 cysteine-type endopeptidase regulator activity involved in apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043129 surfactant homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0043171 peptide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043277 apoptotic cell clearance IEP Predict GO terms from Neighborhoods
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043628 small regulatory ncRNA 3'-end processing IEP Predict GO terms from Neighborhoods
BP GO:0043633 polyadenylation-dependent RNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044247 cellular polysaccharide catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044255 cellular lipid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044264 cellular polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044275 cellular carbohydrate catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044550 secondary metabolite biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0045169 fusome IEP Predict GO terms from Neighborhoods
BP GO:0045765 regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045766 positive regulation of angiogenesis IEP Predict GO terms from Neighborhoods
BP GO:0046149 pigment catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046246 terpene biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046351 disaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046662 regulation of oviposition IEP Predict GO terms from Neighborhoods
MF GO:0046905 15-cis-phytoene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0047084 methyltetrahydroprotoberberine 14-monooxygenase activity IEP Predict GO terms from Neighborhoods
MF GO:0047087 protopine 6-monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0048521 negative regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0048875 chemical homeostasis within a tissue IEP Predict GO terms from Neighborhoods
BP GO:0050795 regulation of behavior IEP Predict GO terms from Neighborhoods
BP GO:0051189 prosthetic group metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051241 negative regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0060448 dichotomous subdivision of terminal units involved in lung branching IEP Predict GO terms from Neighborhoods
BP GO:0060600 dichotomous subdivision of an epithelial terminal unit IEP Predict GO terms from Neighborhoods
BP GO:0060785 regulation of apoptosis involved in tissue homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0060968 obsolete regulation of gene silencing IEP Predict GO terms from Neighborhoods
MF GO:0062131 3-butenylglucosinolate 2-hydroxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0070324 thyroid hormone binding IEP Predict GO terms from Neighborhoods
BP GO:0070371 ERK1 and ERK2 cascade IEP Predict GO terms from Neighborhoods
BP GO:0070482 response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0070613 regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0071241 cellular response to inorganic substance IEP Predict GO terms from Neighborhoods
BP GO:0071248 cellular response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0071272 morphine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0071281 cellular response to iron ion IEP Predict GO terms from Neighborhoods
BP GO:0071453 cellular response to oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0071456 cellular response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0080027 response to herbivore IEP Predict GO terms from Neighborhoods
MF GO:0080054 low-affinity nitrate transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEP Predict GO terms from Neighborhoods
MF GO:0097007 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0097008 (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0097066 response to thyroid hormone IEP Predict GO terms from Neighborhoods
BP GO:0097067 cellular response to thyroid hormone stimulus IEP Predict GO terms from Neighborhoods
CC GO:0097208 alveolar lamellar body IEP Predict GO terms from Neighborhoods
BP GO:0097295 morphine biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0099080 supramolecular complex IEP Predict GO terms from Neighborhoods
MF GO:0102229 amylopectin maltohydrolase activity IEP Predict GO terms from Neighborhoods
MF GO:0106144 fraxetin 5-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0106146 sideretin biosynthesis IEP Predict GO terms from Neighborhoods
MF GO:0106149 indole-3-carbonyl nitrile 4-hydroxylase activity IEP Predict GO terms from Neighborhoods
BP GO:0120251 hydrocarbon biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0120252 hydrocarbon metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0140375 immune receptor activity IEP Predict GO terms from Neighborhoods
BP GO:1900992 (-)-secologanin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1900994 (-)-secologanin biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901045 negative regulation of oviposition IEP Predict GO terms from Neighborhoods
BP GO:1901259 chloroplast rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:1901342 regulation of vasculature development IEP Predict GO terms from Neighborhoods
BP GO:1901376 organic heteropentacyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901378 organic heteropentacyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901806 beta-glucoside biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1903186 regulation of vitellogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903188 positive regulation of vitellogenesis IEP Predict GO terms from Neighborhoods
BP GO:1903317 regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1904018 positive regulation of vasculature development IEP Predict GO terms from Neighborhoods
CC GO:1904813 ficolin-1-rich granule lumen IEP Predict GO terms from Neighborhoods
BP GO:1905691 lipid droplet disassembly IEP Predict GO terms from Neighborhoods
MF GO:1990538 xylan O-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:1990834 response to odorant IEP Predict GO terms from Neighborhoods
BP GO:2000241 regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2000242 negative regulation of reproductive process IEP Predict GO terms from Neighborhoods
BP GO:2001235 positive regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036104 BFN_sf 115 276
IPR003729 Bi_nuclease_dom 189 268
No external refs found!