Description : Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Gene families : OG_02_0003931 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000044087 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_254 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000126 | transcription factor TFIIIB complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000243 | commitment complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000389 | mRNA 3'-splice site recognition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000469 | cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000478 | endonucleolytic cleavage involved in rRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000479 | endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000992 | RNA polymerase III cis-regulatory region sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001006 | RNA polymerase III type 3 promoter sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001016 | RNA polymerase III transcription regulatory region sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001568 | blood vessel development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001779 | natural killer cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001824 | blastocyst development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001843 | neural tube closure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002119 | nematode larval development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002164 | larval development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002225 | positive regulation of antimicrobial peptide production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002521 | leukocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002699 | positive regulation of immune effector process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002700 | regulation of production of molecular mediator of immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002702 | positive regulation of production of molecular mediator of immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002759 | regulation of antimicrobial humoral response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002760 | positive regulation of antimicrobial humoral response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002784 | regulation of antimicrobial peptide production | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002920 | regulation of humoral immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002922 | positive regulation of humoral immune response | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003170 | heart valve development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003279 | cardiac septum development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003281 | ventricular septum development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004521 | endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004693 | cyclin-dependent protein serine/threonine kinase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005667 | transcription regulator complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005849 | mRNA cleavage factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006261 | DNA-templated DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006376 | mRNA splice site selection | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006384 | transcription initiation at RNA polymerase III promoter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006446 | regulation of translational initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007089 | traversing start control point of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008187 | poly-pyrimidine tract binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008233 | peptidase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008592 | regulation of Toll signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008593 | regulation of Notch signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010171 | body morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010172 | embryonic body morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010962 | regulation of glucan biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016251 | RNA polymerase II general transcription initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016273 | arginine N-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016274 | protein-arginine N-methyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016891 | endoribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018107 | peptidyl-threonine phosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018195 | peptidyl-arginine modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018210 | peptidyl-threonine modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0018216 | peptidyl-arginine methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019538 | protein metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030098 | lymphocyte differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030101 | natural killer cell activation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030628 | pre-mRNA 3'-splice site binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031175 | neuron projection development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031329 | regulation of cellular catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031345 | negative regulation of cell projection organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031426 | polycistronic mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032239 | regulation of nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032241 | positive regulation of nucleobase-containing compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032838 | plasma membrane bounded cell projection cytoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032839 | dendrite cytoplasm | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032950 | regulation of beta-glucan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032951 | regulation of beta-glucan biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032952 | regulation of (1->3)-beta-D-glucan metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032953 | regulation of (1->3)-beta-D-glucan biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033120 | positive regulation of RNA splicing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034414 | tRNA 3'-trailer cleavage, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035148 | tube formation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0035241 | protein-arginine omega-N monomethyltransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035246 | peptidyl-arginine N-methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035247 | peptidyl-arginine omega-N-methylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035904 | aorta development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0036002 | pre-mRNA binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0036064 | ciliary basal body | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036211 | protein modification process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040019 | positive regulation of embryonic development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042023 | DNA endoreduplication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042779 | tRNA 3'-trailer cleavage | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042781 | 3'-tRNA processing endoribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043412 | macromolecule modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044786 | cell cycle DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045752 | positive regulation of Toll signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045948 | positive regulation of translational initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046824 | positive regulation of nucleocytoplasmic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046831 | regulation of RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046833 | positive regulation of RNA export from nucleus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048646 | anatomical structure formation involved in morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050684 | regulation of mRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060341 | regulation of cellular localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060491 | regulation of cell projection assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060606 | tube closure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060706 | cell differentiation involved in embryonic placenta development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060707 | trophoblast giant cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060708 | spongiotrophoblast differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060840 | artery development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070534 | protein K63-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070742 | C2H2 zinc finger domain binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071004 | U2-type prespliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071010 | prespliceosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071598 | neuronal ribonucleoprotein granule | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071920 | cleavage body | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0089701 | U2AF complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090305 | nucleic acid phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090501 | RNA phosphodiester bond hydrolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090502 | RNA phosphodiester bond hydrolysis, endonucleolytic | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090576 | RNA polymerase III transcription regulator complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097472 | cyclin-dependent protein kinase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098781 | ncRNA transcription | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099568 | cytoplasmic region | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120032 | regulation of plasma membrane bounded cell projection assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120033 | negative regulation of plasma membrane bounded cell projection assembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0120111 | neuron projection cytoplasm | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140223 | general transcription initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900087 | positive regulation of G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902017 | regulation of cilium assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902018 | negative regulation of cilium assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902116 | negative regulation of organelle assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902806 | regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902808 | positive regulation of cell cycle G1/S phase transition | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903076 | regulation of protein localization to plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903077 | negative regulation of protein localization to plasma membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903131 | mononuclear cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904375 | regulation of protein localization to cell periphery | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904376 | negative regulation of protein localization to cell periphery | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905267 | endonucleolytic cleavage involved in tRNA processing | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905476 | negative regulation of protein localization to membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990935 | splicing factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000045 | regulation of G1/S transition of mitotic cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000779 | regulation of double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| No external refs found! |