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  5. SOLTUB.AGRIA.G00000044285

SOLTUB.AGRIA.G00000044285


Description : Carbamoyl-phosphate synthase large chain


Gene families : OG_02_0006266 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000044285
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_39


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0000287 magnesium ion binding IEP Predict GO terms from Neighborhoods
MF GO:0001882 nucleoside binding IEP Predict GO terms from Neighborhoods
MF GO:0001884 pyrimidine nucleoside binding IEP Predict GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Predict GO terms from Neighborhoods
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Predict GO terms from Neighborhoods
MF GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity IEP Predict GO terms from Neighborhoods
MF GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity IEP Predict GO terms from Neighborhoods
MF GO:0004136 deoxyadenosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004137 deoxycytidine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004138 deoxyguanosine kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0004638 phosphoribosylaminoimidazole carboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Predict GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006144 purine nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006163 purine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0006167 AMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006188 IMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006189 'de novo' IMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006222 UMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006261 DNA-templated DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006264 mitochondrial DNA replication IEP Predict GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Predict GO terms from Neighborhoods
BP GO:0006525 arginine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006526 arginine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006753 nucleoside phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006793 phosphorus metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006796 phosphate-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0007416 synapse assembly IEP Predict GO terms from Neighborhoods
BP GO:0007529 establishment of synaptic specificity at neuromuscular junction IEP Predict GO terms from Neighborhoods
MF GO:0008940 nitrate reductase activity IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009112 nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009113 purine nucleobase biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009116 nucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009117 nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009120 deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009123 nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009129 pyrimidine nucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009132 nucleoside diphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009151 purine deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009162 deoxyribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009165 nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009262 deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0009295 nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0009330 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex IEP Predict GO terms from Neighborhoods
BP GO:0009394 2'-deoxyribonucleotide metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Predict GO terms from Neighborhoods
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predict GO terms from Neighborhoods
MF GO:0016829 lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016840 carbon-nitrogen lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016842 amidine-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predict GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predict GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0018315 molybdenum incorporation into molybdenum-molybdopterin complex IEP Predict GO terms from Neighborhoods
MF GO:0019136 deoxynucleoside kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019205 nucleobase-containing compound kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0019206 nucleoside kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019637 organophosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019692 deoxyribose phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0019897 extrinsic component of plasma membrane IEP Predict GO terms from Neighborhoods
MF GO:0030151 molybdenum ion binding IEP Predict GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Predict GO terms from Neighborhoods
CC GO:0031234 extrinsic component of cytoplasmic side of plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Predict GO terms from Neighborhoods
BP GO:0032042 mitochondrial DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0032546 deoxyribonucleoside binding IEP Predict GO terms from Neighborhoods
MF GO:0032548 pyrimidine deoxyribonucleoside binding IEP Predict GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Predict GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Predict GO terms from Neighborhoods
BP GO:0034329 cell junction assembly IEP Predict GO terms from Neighborhoods
BP GO:0034331 cell junction maintenance IEP Predict GO terms from Neighborhoods
MF GO:0034335 DNA negative supercoiling activity IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0035418 protein localization to synapse IEP Predict GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predict GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Predict GO terms from Neighborhoods
BP GO:0042040 metal incorporation into metallo-molybdopterin complex IEP Predict GO terms from Neighborhoods
BP GO:0042278 purine nucleoside metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0042644 chloroplast nucleoid IEP Predict GO terms from Neighborhoods
CC GO:0042646 plastid nucleoid IEP Predict GO terms from Neighborhoods
BP GO:0043113 receptor clustering IEP Predict GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Predict GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Predict GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Predict GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Predict GO terms from Neighborhoods
BP GO:0043545 molybdopterin cofactor metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0043546 molybdopterin cofactor binding IEP Predict GO terms from Neighborhoods
MF GO:0043727 5-amino-4-imidazole carboxylate lyase activity IEP Predict GO terms from Neighborhoods
BP GO:0043954 cellular component maintenance IEP Predict GO terms from Neighborhoods
BP GO:0044205 'de novo' UMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044208 'de novo' AMP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0045211 postsynaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0046033 AMP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046040 IMP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046049 UMP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046083 adenine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046084 adenine biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046092 deoxycytidine metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046112 nucleobase biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046125 pyrimidine deoxyribonucleoside metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0046390 ribose phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Predict GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Predict GO terms from Neighborhoods
BP GO:0046939 nucleotide phosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0050808 synapse organization IEP Predict GO terms from Neighborhoods
MF GO:0050897 cobalt ion binding IEP Predict GO terms from Neighborhoods
BP GO:0051189 prosthetic group metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0060077 inhibitory synapse IEP Predict GO terms from Neighborhoods
MF GO:0061598 molybdopterin adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0061599 molybdopterin molybdotransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0062237 protein localization to postsynapse IEP Predict GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Predict GO terms from Neighborhoods
MF GO:0070566 adenylyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0070626 (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity IEP Predict GO terms from Neighborhoods
BP GO:0071230 cellular response to amino acid stimulus IEP Predict GO terms from Neighborhoods
BP GO:0072521 purine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072522 purine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0072578 neurotransmitter-gated ion channel clustering IEP Predict GO terms from Neighborhoods
BP GO:0072579 glycine receptor clustering IEP Predict GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090407 organophosphate biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0097060 synaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0097106 postsynaptic density organization IEP Predict GO terms from Neighborhoods
BP GO:0097112 gamma-aminobutyric acid receptor clustering IEP Predict GO terms from Neighborhoods
BP GO:0097120 receptor localization to synapse IEP Predict GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Predict GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Predict GO terms from Neighborhoods
CC GO:0098690 glycinergic synapse IEP Predict GO terms from Neighborhoods
MF GO:0098879 structural constituent of postsynaptic specialization IEP Predict GO terms from Neighborhoods
BP GO:0098880 maintenance of postsynaptic specialization structure IEP Predict GO terms from Neighborhoods
MF GO:0098918 structural constituent of synapse IEP Predict GO terms from Neighborhoods
BP GO:0098953 receptor diffusion trapping IEP Predict GO terms from Neighborhoods
BP GO:0098970 postsynaptic neurotransmitter receptor diffusion trapping IEP Predict GO terms from Neighborhoods
CC GO:0098982 GABA-ergic synapse IEP Predict GO terms from Neighborhoods
BP GO:0099072 regulation of postsynaptic membrane neurotransmitter receptor levels IEP Predict GO terms from Neighborhoods
BP GO:0099084 postsynaptic specialization organization IEP Predict GO terms from Neighborhoods
CC GO:0099091 postsynaptic specialization, intracellular component IEP Predict GO terms from Neighborhoods
CC GO:0099144 anchored component of synaptic membrane IEP Predict GO terms from Neighborhoods
MF GO:0099186 structural constituent of postsynapse IEP Predict GO terms from Neighborhoods
CC GO:0099240 intrinsic component of synaptic membrane IEP Predict GO terms from Neighborhoods
BP GO:0099558 maintenance of synapse structure IEP Predict GO terms from Neighborhoods
BP GO:0099628 neurotransmitter receptor diffusion trapping IEP Predict GO terms from Neighborhoods
BP GO:0099633 protein localization to postsynaptic specialization membrane IEP Predict GO terms from Neighborhoods
BP GO:0099645 neurotransmitter receptor localization to postsynaptic specialization membrane IEP Predict GO terms from Neighborhoods
BP GO:1900871 chloroplast mRNA modification IEP Predict GO terms from Neighborhoods
BP GO:1901135 carbohydrate derivative metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Predict GO terms from Neighborhoods
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901657 glycosyl compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902414 protein localization to cell junction IEP Predict GO terms from Neighborhoods
BP GO:1903539 protein localization to postsynaptic membrane IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR036897 CarbamoylP_synth_lsu_oligo_sf 488 646
IPR016185 PreATP-grasp_dom_sf 95 219
IPR011607 MGS-like_dom 1064 1149
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 220 427
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 778 980
IPR005480 CarbamoylP_synth_lsu_oligo 519 596
IPR016185 PreATP-grasp_dom_sf 648 780
IPR006275 CarbamoylP_synth_lsu 95 1160
IPR036914 MGS-like_dom_sf 1042 1179
No external refs found!