1. Home
  2. Species
  3. Solanum tuberosum Agria
  4. Sequence
  5. SOLTUB.AGRIA.G00000006227

SOLTUB.AGRIA.G00000006227


Description : Tm-1 protein


Gene families : OG_02_0012778 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006227
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_60


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
MF GO:0042803 protein homodimerization activity IEA AHRD
BP GO:0044830 modulation by host of viral RNA genome replication IEA AHRD
BP GO:0051607 defense response to virus IEA AHRD
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0000271 polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0000919 cell plate assembly IEP Predict GO terms from Neighborhoods
BP GO:0001654 eye development IEP Predict GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005347 ATP transmembrane transporter activity IEP Predict GO terms from Neighborhoods
CC GO:0005743 mitochondrial inner membrane IEP Predict GO terms from Neighborhoods
CC GO:0005768 endosome IEP Predict GO terms from Neighborhoods
CC GO:0005798 Golgi-associated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0005802 trans-Golgi network IEP Predict GO terms from Neighborhoods
CC GO:0005881 cytoplasmic microtubule IEP Predict GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006073 cellular glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006497 protein lipidation IEP Predict GO terms from Neighborhoods
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Predict GO terms from Neighborhoods
BP GO:0006517 protein deglycosylation IEP Predict GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0006810 transport IEP Predict GO terms from Neighborhoods
BP GO:0006816 calcium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006817 phosphate ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006851 mitochondrial calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0006862 nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0006874 cellular calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0006970 response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:0007423 sensory organ development IEP Predict GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009100 glycoprotein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009611 response to wounding IEP Predict GO terms from Neighborhoods
BP GO:0009825 multidimensional cell growth IEP Predict GO terms from Neighborhoods
BP GO:0009832 plant-type cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009833 plant-type primary cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0010005 cortical microtubule, transverse to long axis IEP Predict GO terms from Neighborhoods
BP GO:0010065 primary meristem tissue development IEP Predict GO terms from Neighborhoods
BP GO:0010068 protoderm histogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010192 mucilage biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0010330 cellulose synthase complex IEP Predict GO terms from Neighborhoods
BP GO:0010383 cell wall polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010393 galacturonan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010395 rhamnogalacturonan I metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010400 rhamnogalacturonan I side chain metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010507 negative regulation of autophagy IEP Predict GO terms from Neighborhoods
MF GO:0015085 calcium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015101 organic cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015217 ADP transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015695 organic cation transport IEP Predict GO terms from Neighborhoods
BP GO:0015748 organophosphate ester transport IEP Predict GO terms from Neighborhoods
BP GO:0015865 purine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0015866 ADP transport IEP Predict GO terms from Neighborhoods
BP GO:0015867 ATP transport IEP Predict GO terms from Neighborhoods
BP GO:0015868 purine ribonucleotide transport IEP Predict GO terms from Neighborhoods
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
CC GO:0016021 integral component of membrane IEP Predict GO terms from Neighborhoods
BP GO:0016049 cell growth IEP Predict GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0016409 palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016417 S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Predict GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Predict GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predict GO terms from Neighborhoods
BP GO:0018198 peptidyl-cysteine modification IEP Predict GO terms from Neighborhoods
BP GO:0018230 peptidyl-L-cysteine S-palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0018231 peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine IEP Predict GO terms from Neighborhoods
BP GO:0018345 protein palmitoylation IEP Predict GO terms from Neighborhoods
BP GO:0018996 molting cycle, collagen and cuticulin-based cuticle IEP Predict GO terms from Neighborhoods
MF GO:0019187 beta-1,4-mannosyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019706 protein-cysteine S-palmitoyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0019707 protein-cysteine S-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0019722 calcium-mediated signaling IEP Predict GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Predict GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
CC GO:0030133 transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030135 coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030136 clathrin-coated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030140 trans-Golgi network transport vesicle IEP Predict GO terms from Neighborhoods
CC GO:0030173 integral component of Golgi membrane IEP Predict GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
MF GO:0030695 GTPase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0030865 cortical cytoskeleton organization IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031122 cytoplasmic microtubule organization IEP Predict GO terms from Neighborhoods
CC GO:0031224 intrinsic component of membrane IEP Predict GO terms from Neighborhoods
CC GO:0031228 intrinsic component of Golgi membrane IEP Predict GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Predict GO terms from Neighborhoods
CC GO:0031410 cytoplasmic vesicle IEP Predict GO terms from Neighborhoods
BP GO:0031648 protein destabilization IEP Predict GO terms from Neighborhoods
CC GO:0031982 vesicle IEP Predict GO terms from Neighborhoods
CC GO:0031984 organelle subcompartment IEP Predict GO terms from Neighborhoods
MF GO:0032182 ubiquitin-like protein binding IEP Predict GO terms from Neighborhoods
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0035435 phosphate ion transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0035618 root hair IEP Predict GO terms from Neighborhoods
BP GO:0036444 calcium import into the mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0036503 ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0036507 protein demannosylation IEP Predict GO terms from Neighborhoods
BP GO:0036508 protein alpha-1,2-demannosylation IEP Predict GO terms from Neighborhoods
BP GO:0040007 growth IEP Predict GO terms from Neighborhoods
BP GO:0040039 inductive cell migration IEP Predict GO terms from Neighborhoods
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predict GO terms from Neighborhoods
BP GO:0042303 molting cycle IEP Predict GO terms from Neighborhoods
BP GO:0042546 cell wall biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0043010 camera-type eye development IEP Predict GO terms from Neighborhoods
BP GO:0043087 regulation of GTPase activity IEP Predict GO terms from Neighborhoods
MF GO:0043130 ubiquitin binding IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043622 cortical microtubule organization IEP Predict GO terms from Neighborhoods
BP GO:0044036 cell wall macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0044088 regulation of vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044262 cellular carbohydrate metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044264 cellular polysaccharide metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0044390 ubiquitin-like protein conjugating enzyme binding IEP Predict GO terms from Neighborhoods
BP GO:0045333 cellular respiration IEP Predict GO terms from Neighborhoods
BP GO:0045488 pectin metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048507 meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048508 embryonic meristem development IEP Predict GO terms from Neighborhoods
BP GO:0048588 developmental cell growth IEP Predict GO terms from Neighborhoods
BP GO:0048767 root hair elongation IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051179 localization IEP Predict GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Predict GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0051282 regulation of sequestering of calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051503 adenine nucleotide transport IEP Predict GO terms from Neighborhoods
BP GO:0051560 mitochondrial calcium ion homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0051561 positive regulation of mitochondrial calcium ion concentration IEP Predict GO terms from Neighborhoods
BP GO:0051592 response to calcium ion IEP Predict GO terms from Neighborhoods
MF GO:0051753 mannan synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0052546 cell wall pectin metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0055001 muscle cell development IEP Predict GO terms from Neighborhoods
BP GO:0055002 striated muscle cell development IEP Predict GO terms from Neighborhoods
CC GO:0055028 cortical microtubule IEP Predict GO terms from Neighborhoods
BP GO:0055074 calcium ion homeostasis IEP Predict GO terms from Neighborhoods
CC GO:0055120 striated muscle dense body IEP Predict GO terms from Neighborhoods
BP GO:0060147 regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060148 positive regulation of post-transcriptional gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0060560 developmental growth involved in morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predict GO terms from Neighborhoods
BP GO:0060966 regulation of gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:0060972 left/right pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0070534 protein K63-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0070588 calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0070936 protein K48-linked ubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0071248 cellular response to metal ion IEP Predict GO terms from Neighborhoods
BP GO:0071277 cellular response to calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0071712 ER-associated misfolded protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0080121 AMP transport IEP Predict GO terms from Neighborhoods
MF GO:0080122 AMP transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0080135 regulation of cellular response to stress IEP Predict GO terms from Neighborhoods
BP GO:0090558 plant epidermis development IEP Predict GO terms from Neighborhoods
BP GO:0097274 urea homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0097502 mannosylation IEP Predict GO terms from Neighborhoods
CC GO:0097708 intracellular vesicle IEP Predict GO terms from Neighborhoods
BP GO:0098661 inorganic anion transmembrane transport IEP Predict GO terms from Neighborhoods
CC GO:0098791 Golgi apparatus subcompartment IEP Predict GO terms from Neighborhoods
BP GO:0106049 regulation of cellular response to osmotic stress IEP Predict GO terms from Neighborhoods
BP GO:1900069 regulation of cellular hyperosmotic salinity response IEP Predict GO terms from Neighborhoods
BP GO:1900368 regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1900370 positive regulation of post-transcriptional gene silencing by RNA IEP Predict GO terms from Neighborhoods
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900459 positive regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901264 carbohydrate derivative transport IEP Predict GO terms from Neighborhoods
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902115 regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1903047 mitotic cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:1903052 positive regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904292 regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904294 positive regulation of ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:1904380 endoplasmic reticulum mannose trimming IEP Predict GO terms from Neighborhoods
BP GO:1905897 regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
BP GO:1905898 positive regulation of response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
CC GO:1990234 transferase complex IEP Predict GO terms from Neighborhoods
BP GO:1990542 mitochondrial transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:2000785 regulation of autophagosome assembly IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR044122 UPF0261_dom 9 428
IPR009215 TIM-br_IGPS-like 486 751
IPR015813 Pyrv/PenolPyrv_Kinase-like_dom 483 674
No external refs found!