SOLTUB.AGRIA.G00000006614


Description : Ubiquitin-conjugating enzyme (E2)


Gene families : OG_02_0000509 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000006614
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_202

Target Alias Description ECC score Gene Family Method Actions
SOLTUB.AGRIA.G00000006578 No alias Ubiquitin-conjugating enzyme 0.14 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000006578 No alias Ubiquitin-conjugating enzyme 0.14 Orthogroups with 8 Potato genotypes
SOLTUB.AGRIA.G00000006578 No alias Ubiquitin-conjugating enzyme 0.14 Orthogroups with 8 Potato genotypes

Type GO Term Name Evidence Source
BP GO:0000422 autophagy of mitochondrion IEA AHRD
BP GO:0000722 telomere maintenance via recombination IEA AHRD
BP GO:0000724 double-strand break repair via homologous recombination IEA AHRD
CC GO:0000781 chromosome, telomeric region IEA AHRD
BP GO:0001666 response to hypoxia IEA AHRD
CC GO:0001741 XY body IEA AHRD
BP GO:0001835 blastocyst hatching IEA AHRD
MF GO:0002039 p53 binding IEA AHRD
MF GO:0003697 single-stranded DNA binding IEA AHRD
MF GO:0005524 ATP binding IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005657 replication fork IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006353 DNA-templated transcription termination IEA AHRD
BP GO:0006366 transcription by RNA polymerase II IEA AHRD
BP GO:0007288 sperm axoneme assembly IEA AHRD
BP GO:0007507 heart development IEA AHRD
BP GO:0008284 positive regulation of cell population proliferation IEA AHRD
BP GO:0009411 response to UV IEA AHRD
BP GO:0010228 vegetative to reproductive phase transition of meristem IEA AHRD
BP GO:0010390 histone monoubiquitination IEA AHRD
BP GO:0010845 positive regulation of reciprocal meiotic recombination IEA AHRD
MF GO:0017116 single-stranded DNA helicase activity IEA AHRD
MF GO:0019904 protein domain specific binding IEA AHRD
BP GO:0030433 ubiquitin-dependent ERAD pathway IEA AHRD
BP GO:0030435 sporulation resulting in formation of a cellular spore IEA AHRD
BP GO:0031571 mitotic G1 DNA damage checkpoint signaling IEA AHRD
MF GO:0031625 ubiquitin protein ligase binding IEA AHRD
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA AHRD
BP GO:0032456 endocytic recycling IEA AHRD
BP GO:0032508 DNA duplex unwinding IEA AHRD
BP GO:0032869 cellular response to insulin stimulus IEA AHRD
BP GO:0033128 obsolete negative regulation of histone phosphorylation IEA AHRD
CC GO:0033503 HULC complex IEA AHRD
BP GO:0033522 histone H2A ubiquitination IEA AHRD
BP GO:0042138 meiotic DNA double-strand break formation IEA AHRD
BP GO:0042275 error-free postreplication DNA repair IEA AHRD
BP GO:0042276 error-prone translesion synthesis IEA AHRD
MF GO:0043130 ubiquitin binding IEA AHRD
BP GO:0043518 negative regulation of DNA damage response, signal transduction by p53 class mediator IEA AHRD
BP GO:0043951 negative regulation of cAMP-mediated signaling IEA AHRD
BP GO:0045141 meiotic telomere clustering IEA AHRD
BP GO:0050821 protein stabilization IEA AHRD
BP GO:0051026 chiasma assembly IEA AHRD
BP GO:0051299 centrosome separation IEA AHRD
BP GO:0051569 regulation of histone H3-K4 methylation IEA AHRD
BP GO:0051865 protein autoubiquitination IEA AHRD
BP GO:0060135 maternal process involved in female pregnancy IEA AHRD
MF GO:0061631 ubiquitin conjugating enzyme activity IEA AHRD
BP GO:0070076 histone lysine demethylation IEA AHRD
BP GO:0070193 synaptonemal complex organization IEA AHRD
BP GO:0070373 negative regulation of ERK1 and ERK2 cascade IEA AHRD
BP GO:0070534 protein K63-linked ubiquitination IEA AHRD
MF GO:0070628 proteasome binding IEA AHRD
BP GO:0070829 obsolete heterochromatin maintenance IEA AHRD
BP GO:0070936 protein K48-linked ubiquitination IEA AHRD
BP GO:0070979 protein K11-linked ubiquitination IEA AHRD
BP GO:0070987 error-free translesion synthesis IEA AHRD
BP GO:0071455 cellular response to hyperoxia IEA AHRD
BP GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway IEA AHRD
BP GO:0071629 cytoplasm protein quality control by the ubiquitin-proteasome system IEA AHRD
BP GO:0071894 histone H2B conserved C-terminal lysine ubiquitination IEA AHRD
BP GO:0090089 regulation of dipeptide transport IEA AHRD
BP GO:0090263 positive regulation of canonical Wnt signaling pathway IEA AHRD
CC GO:0097505 Rad6-Rad18 complex IEA AHRD
BP GO:0120174 stress-induced homeostatically regulated protein degradation pathway IEA AHRD
BP GO:1902166 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEA AHRD
CC GO:1990303 UBR1-RAD6 ubiquitin ligase complex IEA AHRD
CC GO:1990304 MUB1-RAD6-UBR2 ubiquitin ligase complex IEA AHRD
BP GO:2000639 negative regulation of SREBP signaling pathway IEA AHRD
Type GO Term Name Evidence Source
BP GO:0002683 negative regulation of immune system process IEP Predict GO terms from Neighborhoods
BP GO:0010363 regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
BP GO:0034051 negative regulation of plant-type hypersensitive response IEP Predict GO terms from Neighborhoods
MF GO:0043424 protein histidine kinase binding IEP Predict GO terms from Neighborhoods
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP Predict GO terms from Neighborhoods
BP GO:0045824 negative regulation of innate immune response IEP Predict GO terms from Neighborhoods
BP GO:0050777 negative regulation of immune response IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
IPR016135 UBQ-conjugating_enzyme/RWD 1 150
No external refs found!