Description : 50S ribosomal-like protein
Gene families : OG_02_0018873 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000008237 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_62 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000217 | DNA secondary structure binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000329 | fungal-type vacuole membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004529 | exodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005385 | zinc ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005657 | replication fork | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005784 | Sec61 translocon complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006261 | DNA-templated DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006616 | SRP-dependent cotranslational protein targeting to membrane, translocation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006775 | fat-soluble vitamin metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006824 | cobalt ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006828 | manganese ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006829 | zinc ion transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006877 | cellular cobalt ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007605 | sensory perception of sound | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008296 | 3'-5'-exodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008320 | protein transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009739 | response to gibberellin | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009886 | post-embryonic animal morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009913 | epidermal cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010029 | regulation of seed germination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010155 | regulation of proton transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010259 | multicellular organism aging | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010721 | negative regulation of cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010977 | negative regulation of neuron projection development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015450 | protein-transporting ATPase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016151 | nickel cation binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016289 | CoA hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016605 | PML body | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016790 | thiolester hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016796 | exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016895 | exodeoxyribonuclease activity, producing 5'-phosphomonoesters | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019838 | growth factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030433 | ubiquitin-dependent ERAD pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030516 | regulation of axon extension | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030517 | negative regulation of axon extension | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030667 | secretory granule membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030970 | retrograde protein transport, ER to cytosol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031100 | animal organ regeneration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031175 | neuron projection development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031204 | post-translational protein targeting to membrane, translocation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031205 | endoplasmic reticulum Sec complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031345 | negative regulation of cell projection organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031540 | regulation of anthocyanin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032119 | sequestering of zinc ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032392 | DNA geometric change | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032420 | stereocilium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032508 | DNA duplex unwinding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032527 | protein exit from endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034214 | protein hexamerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035315 | hair cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040009 | regulation of growth rate | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042023 | DNA endoreduplication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042181 | ketone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042362 | fat-soluble vitamin biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042371 | vitamin K biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042372 | phylloquinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042373 | vitamin K metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042374 | phylloquinone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042490 | mechanoreceptor differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042491 | inner ear auditory receptor cell differentiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042562 | hormone binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042753 | positive regulation of circadian rhythm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043005 | neuron projection | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043022 | ribosome binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043433 | negative regulation of DNA-binding transcription factor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044322 | endoplasmic reticulum quality control compartment | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044786 | cell cycle DNA replication | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044806 | G-quadruplex DNA unwinding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045005 | DNA-templated DNA replication maintenance of fidelity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045048 | protein insertion into ER membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046967 | cytosol to endoplasmic reticulum transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048408 | epidermal growth factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048467 | gynoecium development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048563 | post-embryonic animal organ morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048666 | neuron development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050768 | negative regulation of neurogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050770 | regulation of axonogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050771 | negative regulation of axonogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050954 | sensory perception of mechanical stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051205 | protein insertion into membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051238 | sequestering of metal ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051259 | protein complex oligomerization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051289 | protein homotetramerization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051377 | mannose-ethanolamine phosphotransferase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051651 | maintenance of location in cell | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0051880 | G-quadruplex DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051961 | negative regulation of nervous system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055068 | cobalt ion homeostasis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0060091 | kinocilium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060113 | inner ear receptor cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060118 | vestibular receptor cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060119 | inner ear receptor cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060122 | inner ear receptor cell stereocilium organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061387 | regulation of extent of cell growth | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061522 | 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061687 | detoxification of inorganic compound | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062111 | zinc ion import into organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070936 | protein K48-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071256 | translocon complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071577 | zinc ion transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071585 | detoxification of cadmium ion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071816 | tail-anchored membrane protein insertion into ER membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080086 | stamen filament development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080140 | regulation of jasmonic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080141 | regulation of jasmonic acid biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090399 | replicative senescence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097421 | liver regeneration | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097730 | non-motile cilium | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097732 | 9+2 non-motile cilium | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098554 | cytoplasmic side of endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098556 | cytoplasmic side of rough endoplasmic reticulum membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098849 | cellular detoxification of cadmium ion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098858 | actin-based cell projection | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0106099 | 2-keto-3-deoxy-L-rhamnonate aldolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140209 | zinc ion import into endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140318 | protein transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140820 | cytosol to Golgi apparatus transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900056 | negative regulation of leaf senescence | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1900140 | regulation of seedling development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901661 | quinone metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901663 | quinone biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903513 | endoplasmic reticulum to cytosol transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904257 | zinc ion import into Golgi lumen | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990823 | response to leukemia inhibitory factor | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990830 | cellular response to leukemia inhibitory factor | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |