SOLTUB.AGRIA.G00000010495

Description : RNA-binding KH domain-containing protein

Gene families : OG_02_0002441 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000010495
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_254

Type	GO Term	Name	Evidence	Source
CC	GO:0000243	commitment complex	IEA	AHRD
BP	GO:0000389	mRNA 3'-splice site recognition	IEA	AHRD
BP	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEA	AHRD
BP	GO:0000469	cleavage involved in rRNA processing	None	Extended
BP	GO:0000478	endonucleolytic cleavage involved in rRNA processing	None	Extended
BP	GO:0000479	endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEA	AHRD
BP	GO:0001570	vasculogenesis	IEA	AHRD
BP	GO:0001676	long-chain fatty acid metabolic process	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003727	single-stranded RNA binding	None	Extended
MF	GO:0003729	mRNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005681	spliceosomal complex	None	Extended
CC	GO:0005684	U2-type spliceosomal complex	None	Extended
CC	GO:0005730	nucleolus	IEA	AHRD
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	None	Extended
BP	GO:0006376	mRNA splice site selection	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0006997	nucleus organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0007272	ensheathment of neurons	None	Extended
BP	GO:0007281	germ cell development	None	Extended
BP	GO:0007286	spermatid development	IEA	AHRD
BP	GO:0007420	brain development	IEA	AHRD
BP	GO:0007530	sex determination	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008187	poly-pyrimidine tract binding	None	Extended
MF	GO:0008266	poly(U) RNA binding	IEA	AHRD
BP	GO:0008366	axon ensheathment	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009894	regulation of catabolic process	None	Extended
BP	GO:0009895	negative regulation of catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010608	post-transcriptional regulation of gene expression	None	Extended
BP	GO:0010628	positive regulation of gene expression	None	Extended
BP	GO:0010656	negative regulation of muscle cell apoptotic process	None	Extended
BP	GO:0010660	regulation of muscle cell apoptotic process	None	Extended
BP	GO:0010662	regulation of striated muscle cell apoptotic process	None	Extended
BP	GO:0010664	negative regulation of striated muscle cell apoptotic process	None	Extended
BP	GO:0010665	regulation of cardiac muscle cell apoptotic process	None	Extended
BP	GO:0010667	negative regulation of cardiac muscle cell apoptotic process	IEA	AHRD
BP	GO:0010720	positive regulation of cell development	None	Extended
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010975	regulation of neuron projection development	None	Extended
BP	GO:0010976	positive regulation of neuron projection development	IEA	AHRD
BP	GO:0014013	regulation of gliogenesis	None	Extended
BP	GO:0014015	positive regulation of gliogenesis	None	Extended
BP	GO:0014028	notochord formation	IEA	AHRD
BP	GO:0014866	skeletal myofibril assembly	IEA	AHRD
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
CC	GO:0016604	nuclear body	IEA	AHRD
BP	GO:0019216	regulation of lipid metabolic process	None	Extended
BP	GO:0019218	regulation of steroid metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0022618	ribonucleoprotein complex assembly	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030036	actin cytoskeleton organization	None	Extended
CC	GO:0030054	cell junction	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030238	male sex determination	IEA	AHRD
BP	GO:0030239	myofibril assembly	None	Extended
BP	GO:0030490	maturation of SSU-rRNA	None	Extended
BP	GO:0030575	nuclear body organization	IEA	AHRD
BP	GO:0031032	actomyosin structure organization	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031329	regulation of cellular catabolic process	None	Extended
BP	GO:0031330	negative regulation of cellular catabolic process	None	Extended
BP	GO:0031344	regulation of cell projection organization	None	Extended
BP	GO:0031346	positive regulation of cell projection organization	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033327	Leydig cell differentiation	IEA	AHRD
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0036002	pre-mRNA binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042552	myelination	IEA	AHRD
BP	GO:0042759	long-chain fatty acid biosynthetic process	IEA	AHRD
MF	GO:0042802	identical protein binding	IEA	AHRD
BP	GO:0042981	regulation of apoptotic process	None	Extended
BP	GO:0043066	negative regulation of apoptotic process	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043484	regulation of RNA splicing	None	Extended
BP	GO:0043487	regulation of RNA stability	None	Extended
BP	GO:0043488	regulation of mRNA stability	None	Extended
BP	GO:0043489	RNA stabilization	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
MF	GO:0045131	pre-mRNA branch point binding	IEA	AHRD
CC	GO:0045202	synapse	IEA	AHRD
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045597	positive regulation of cell differentiation	None	Extended
BP	GO:0045685	regulation of glial cell differentiation	None	Extended
BP	GO:0045687	positive regulation of glial cell differentiation	None	Extended
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
BP	GO:0046890	regulation of lipid biosynthetic process	None	Extended
BP	GO:0048024	regulation of mRNA splicing, via spliceosome	IEA	AHRD
BP	GO:0048255	mRNA stabilization	IEA	AHRD
BP	GO:0048468	cell development	None	Extended
BP	GO:0048513	animal organ development	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048713	regulation of oligodendrocyte differentiation	None	Extended
BP	GO:0048714	positive regulation of oligodendrocyte differentiation	IEA	AHRD
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050684	regulation of mRNA processing	None	Extended
BP	GO:0050767	regulation of neurogenesis	None	Extended
BP	GO:0050769	positive regulation of neurogenesis	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050810	regulation of steroid biosynthetic process	IEA	AHRD
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051960	regulation of nervous system development	None	Extended
BP	GO:0051962	positive regulation of nervous system development	None	Extended
BP	GO:0060034	notochord cell differentiation	IEA	AHRD
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060284	regulation of cell development	None	Extended
BP	GO:0060548	negative regulation of cell death	None	Extended
BP	GO:0061013	regulation of mRNA catabolic process	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0070925	organelle assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071826	ribonucleoprotein complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090305	nucleic acid phosphodiester bond hydrolysis	None	Extended
BP	GO:0090501	RNA phosphodiester bond hydrolysis	None	Extended
BP	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:0120035	regulation of plasma membrane bounded cell projection organization	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
BP	GO:0140694	non-membrane-bounded organelle assembly	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902369	negative regulation of RNA catabolic process	None	Extended
BP	GO:1902373	negative regulation of mRNA catabolic process	None	Extended
BP	GO:1903311	regulation of mRNA metabolic process	None	Extended
BP	GO:1903312	negative regulation of mRNA metabolic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0000731	DNA synthesis involved in DNA repair	IEP	Predict GO terms from Neighborhoods
CC	GO:0000785	chromatin	IEP	Predict GO terms from Neighborhoods
CC	GO:0000791	euchromatin	IEP	Predict GO terms from Neighborhoods
CC	GO:0000792	heterochromatin	IEP	Predict GO terms from Neighborhoods
BP	GO:0000819	sister chromatid segregation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003887	DNA-directed DNA polymerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003995	acyl-CoA dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005654	nucleoplasm	IEP	Predict GO terms from Neighborhoods
CC	GO:0005689	U12-type spliceosomal complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0005694	chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005700	polytene chromosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0005731	nucleolus organizer region	IEP	Predict GO terms from Neighborhoods
CC	GO:0005826	actomyosin contractile ring	IEP	Predict GO terms from Neighborhoods
BP	GO:0005979	regulation of glycogen biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006261	DNA-templated DNA replication	IEP	Predict GO terms from Neighborhoods
BP	GO:0006281	DNA repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006301	postreplication repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006635	fatty acid beta-oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006974	cellular response to DNA damage stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0007224	smoothened signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0007417	central nervous system development	IEP	Predict GO terms from Neighborhoods
MF	GO:0008013	beta-catenin binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0008327	methyl-CpG binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0008630	intrinsic apoptotic signaling pathway in response to DNA damage	IEP	Predict GO terms from Neighborhoods
BP	GO:0009062	fatty acid catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009896	positive regulation of catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009909	regulation of flower development	IEP	Predict GO terms from Neighborhoods
BP	GO:0010225	response to UV-C	IEP	Predict GO terms from Neighborhoods
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	Predict GO terms from Neighborhoods
BP	GO:0010321	regulation of vegetative phase change	IEP	Predict GO terms from Neighborhoods
CC	GO:0010369	chromocenter	IEP	Predict GO terms from Neighborhoods
CC	GO:0010370	perinucleolar chromocenter	IEP	Predict GO terms from Neighborhoods
BP	GO:0010452	histone H3-K36 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0010676	positive regulation of cellular carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010821	regulation of mitochondrion organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0010906	regulation of glucose metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0010907	positive regulation of glucose metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0016035	zeta DNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0016073	snRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016074	sno(s)RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016077	sno(s)RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016078	tRNA catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0016607	nuclear speck	IEP	Predict GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0017099	very-long-chain-acyl-CoA dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018023	peptidyl-lysine trimethylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0018027	peptidyl-lysine dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018107	peptidyl-threonine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0018210	peptidyl-threonine modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0019395	fatty acid oxidation	IEP	Predict GO terms from Neighborhoods
BP	GO:0019985	translesion synthesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0030218	erythrocyte differentiation	IEP	Predict GO terms from Neighborhoods
CC	GO:0030874	nucleolar chromatin	IEP	Predict GO terms from Neighborhoods
BP	GO:0031126	sno(s)RNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031152	aggregation involved in sorocarp development	IEP	Predict GO terms from Neighborhoods
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031331	positive regulation of cellular catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0031440	regulation of mRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0031937	obsolete positive regulation of chromatin silencing	IEP	Predict GO terms from Neighborhoods
BP	GO:0032465	regulation of cytokinesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0032878	regulation of establishment or maintenance of cell polarity	IEP	Predict GO terms from Neighborhoods
BP	GO:0033120	positive regulation of RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0033539	fatty acid beta-oxidation using acyl-CoA dehydrogenase	IEP	Predict GO terms from Neighborhoods
MF	GO:0034061	DNA polymerase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034587	piRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0034661	ncRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0042276	error-prone translesion synthesis	IEP	Predict GO terms from Neighborhoods
CC	GO:0042575	DNA polymerase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0042771	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator	IEP	Predict GO terms from Neighborhoods
MF	GO:0042800	histone methyltransferase activity (H3-K4 specific)	IEP	Predict GO terms from Neighborhoods
BP	GO:0043144	sno(s)RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0043150	DNA synthesis involved in double-strand break repair via homologous recombination	IEP	Predict GO terms from Neighborhoods
BP	GO:0043516	regulation of DNA damage response, signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:0043518	negative regulation of DNA damage response, signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:0043628	small regulatory ncRNA 3'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0043629	ncRNA polyadenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043630	ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043631	RNA polyadenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043633	polyadenylation-dependent RNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043634	polyadenylation-dependent ncRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0044030	regulation of DNA methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044648	histone H3-K4 dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045637	regulation of myeloid cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045646	regulation of erythrocyte differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045725	positive regulation of glycogen biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0045913	positive regulation of carbohydrate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048026	positive regulation of mRNA splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
CC	GO:0048188	Set1C/COMPASS complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0048580	regulation of post-embryonic development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048831	regulation of shoot system development	IEP	Predict GO terms from Neighborhoods
BP	GO:0050685	positive regulation of mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0050779	RNA destabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0050848	regulation of calcium-mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0050849	negative regulation of calcium-mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0051052	regulation of DNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0051568	histone H3-K4 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051570	regulation of histone H3-K9 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0051574	positive regulation of histone H3-K9 methylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0052890	oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor	IEP	Predict GO terms from Neighborhoods
BP	GO:0060211	regulation of nuclear-transcribed mRNA poly(A) tail shortening	IEP	Predict GO terms from Neighborhoods
BP	GO:0060212	negative regulation of nuclear-transcribed mRNA poly(A) tail shortening	IEP	Predict GO terms from Neighborhoods
BP	GO:0060290	transdifferentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061014	positive regulation of mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0061085	regulation of histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061087	positive regulation of histone H3-K27 methylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0061157	mRNA destabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:0070316	regulation of G0 to G1 transition	IEP	Predict GO terms from Neighborhoods
BP	GO:0070317	negative regulation of G0 to G1 transition	IEP	Predict GO terms from Neighborhoods
MF	GO:0070566	adenylyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0070568	guanylyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0070829	obsolete heterochromatin maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0070873	regulation of glycogen metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070875	positive regulation of glycogen metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0070884	regulation of calcineurin-NFAT signaling cascade	IEP	Predict GO terms from Neighborhoods
BP	GO:0070885	negative regulation of calcineurin-NFAT signaling cascade	IEP	Predict GO terms from Neighborhoods
CC	GO:0070938	contractile ring	IEP	Predict GO terms from Neighborhoods
BP	GO:0070987	error-free translesion synthesis	IEP	Predict GO terms from Neighborhoods
MF	GO:0070991	medium-chain-acyl-CoA dehydrogenase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0071025	RNA surveillance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071027	nuclear RNA surveillance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071029	nuclear ncRNA surveillance	IEP	Predict GO terms from Neighborhoods
BP	GO:0071046	nuclear polyadenylation-dependent ncRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071047	polyadenylation-dependent mRNA catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0071076	RNA 3' uridylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0071494	cellular response to UV-C	IEP	Predict GO terms from Neighborhoods
BP	GO:0072091	regulation of stem cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:0072331	signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:0072332	intrinsic apoptotic signaling pathway by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:0080182	histone H3-K4 trimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0090436	leaf pavement cell development	IEP	Predict GO terms from Neighborhoods
BP	GO:0097193	intrinsic apoptotic signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0097692	histone H3-K4 monomethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0098813	nuclear chromosome segregation	IEP	Predict GO terms from Neighborhoods
BP	GO:0106056	regulation of calcineurin-mediated signaling	IEP	Predict GO terms from Neighborhoods
BP	GO:0106057	negative regulation of calcineurin-mediated signaling	IEP	Predict GO terms from Neighborhoods
CC	GO:0110085	mitotic actomyosin contractile ring	IEP	Predict GO terms from Neighborhoods
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Predict GO terms from Neighborhoods
BP	GO:1900109	regulation of histone H3-K9 dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900111	positive regulation of histone H3-K9 dimethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1900151	regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	IEP	Predict GO terms from Neighborhoods
BP	GO:1900152	negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	IEP	Predict GO terms from Neighborhoods
BP	GO:1900363	regulation of mRNA polyadenylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901532	regulation of hematopoietic progenitor cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1901796	regulation of signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:1901797	negative regulation of signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:1902036	regulation of hematopoietic stem cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:1902275	regulation of chromatin organization	IEP	Predict GO terms from Neighborhoods
BP	GO:1902412	regulation of mitotic cytokinesis	IEP	Predict GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1903008	organelle disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:1903313	positive regulation of mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:1905744	regulation of mRNA cis splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:1905746	positive regulation of mRNA cis splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:1905868	regulation of 3'-UTR-mediated mRNA stabilization	IEP	Predict GO terms from Neighborhoods
BP	GO:1905870	positive regulation of 3'-UTR-mediated mRNA stabilization	IEP	Predict GO terms from Neighborhoods
CC	GO:1990234	transferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:2000024	regulation of leaf development	IEP	Predict GO terms from Neighborhoods
BP	GO:2000177	regulation of neural precursor cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000179	positive regulation of neural precursor cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000241	regulation of reproductive process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000628	regulation of miRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:2000648	positive regulation of stem cell proliferation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000736	regulation of stem cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:2001021	negative regulation of response to DNA damage stimulus	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	478	547
IPR036875	Znf_CCHC_sf	353	400
IPR036612	KH_dom_type_1_sf	235	361
IPR032570	SF1-HH	120	231
IPR004088	KH_dom_type_1	250	323
IPR035979	RBD_domain_sf	467	578

External Links

No external refs found!

SOLTUB.AGRIA.G00000010495

Expression Profile

Co-expression Networks

Functional Annotation