Coexpression cluster: Cluster_120 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042537 benzene-containing compound metabolic process 32.14% (18/56) 5.01 0.0 0.0
GO:0080167 response to karrikin 35.71% (20/56) 4.38 0.0 0.0
GO:0018973 trinitrotoluene metabolic process 17.86% (10/56) 7.38 0.0 0.0
GO:0018974 2,4,6-trinitrotoluene metabolic process 17.86% (10/56) 7.38 0.0 0.0
GO:0019326 nitrotoluene metabolic process 17.86% (10/56) 7.38 0.0 0.0
GO:0046256 2,4,6-trinitrotoluene catabolic process 17.86% (10/56) 7.38 0.0 0.0
GO:0046260 trinitrotoluene catabolic process 17.86% (10/56) 7.38 0.0 0.0
GO:0046263 nitrotoluene catabolic process 17.86% (10/56) 7.38 0.0 0.0
GO:0072490 toluene-containing compound metabolic process 17.86% (10/56) 7.38 0.0 0.0
GO:0072491 toluene-containing compound catabolic process 17.86% (10/56) 7.38 0.0 0.0
GO:0042631 cellular response to water deprivation 25.0% (14/56) 5.45 0.0 0.0
GO:0003824 catalytic activity 91.07% (51/56) 1.46 0.0 0.0
GO:0071462 cellular response to water stimulus 25.0% (14/56) 5.39 0.0 0.0
GO:0098754 detoxification 28.57% (16/56) 4.7 0.0 0.0
GO:0071229 cellular response to acid chemical 25.0% (14/56) 5.18 0.0 0.0
GO:0035251 UDP-glucosyltransferase activity 26.79% (15/56) 4.75 0.0 0.0
GO:0008194 UDP-glycosyltransferase activity 30.36% (17/56) 4.22 0.0 0.0
GO:0043295 glutathione binding 17.86% (10/56) 6.38 0.0 0.0
GO:1900750 oligopeptide binding 17.86% (10/56) 6.38 0.0 0.0
GO:0009407 toxin catabolic process 17.86% (10/56) 6.29 0.0 0.0
GO:0046527 glucosyltransferase activity 26.79% (15/56) 4.54 0.0 0.0
GO:0052638 indole-3-butyrate beta-glucosyltransferase activity 14.29% (8/56) 7.45 0.0 0.0
GO:0006979 response to oxidative stress 39.29% (22/56) 3.28 0.0 0.0
GO:0016758 hexosyltransferase activity 30.36% (17/56) 4.04 0.0 0.0
GO:0071475 cellular hyperosmotic salinity response 14.29% (8/56) 7.4 0.0 0.0
GO:0005829 cytosol 62.5% (35/56) 2.13 0.0 0.0
GO:0052639 salicylic acid glucosyltransferase (ester-forming) activity 14.29% (8/56) 7.36 0.0 0.0
GO:0052641 benzoic acid glucosyltransferase activity 14.29% (8/56) 7.36 0.0 0.0
GO:0090704 nicotinate-O-glucosyltransferase activity 14.29% (8/56) 7.36 0.0 0.0
GO:0016134 saponin metabolic process 21.43% (12/56) 5.29 0.0 0.0
GO:0016757 glycosyltransferase activity 32.14% (18/56) 3.8 0.0 0.0
GO:0080148 negative regulation of response to water deprivation 17.86% (10/56) 6.04 0.0 0.0
GO:0080002 UDP-glucose:4-aminobenzoate acylglucosyltransferase activity 14.29% (8/56) 7.2 0.0 0.0
GO:0004364 glutathione transferase activity 17.86% (10/56) 6.01 0.0 0.0
GO:0009635 response to herbicide 16.07% (9/56) 6.53 0.0 0.0
GO:0046482 para-aminobenzoic acid metabolic process 14.29% (8/56) 7.13 0.0 0.0
GO:0080024 indolebutyric acid metabolic process 14.29% (8/56) 7.13 0.0 0.0
GO:0071474 cellular hyperosmotic response 14.29% (8/56) 7.05 0.0 0.0
GO:0072341 modified amino acid binding 17.86% (10/56) 5.84 0.0 0.0
GO:0052640 salicylic acid glucosyltransferase (glucoside-forming) activity 14.29% (8/56) 6.96 0.0 0.0
GO:0047215 indole-3-acetate beta-glucosyltransferase activity 14.29% (8/56) 6.92 0.0 0.0
GO:0016740 transferase activity 60.71% (34/56) 2.01 0.0 0.0
GO:0006749 glutathione metabolic process 17.86% (10/56) 5.64 0.0 0.0
GO:0010294 abscisic acid glucosyltransferase activity 14.29% (8/56) 6.64 0.0 0.0
GO:1901681 sulfur compound binding 17.86% (10/56) 5.47 0.0 0.0
GO:0016491 oxidoreductase activity 42.86% (24/56) 2.68 0.0 0.0
GO:0016135 saponin biosynthetic process 17.86% (10/56) 5.31 0.0 0.0
GO:0016137 glycoside metabolic process 21.43% (12/56) 4.56 0.0 0.0
GO:0042221 response to chemical 71.43% (40/56) 1.55 0.0 0.0
GO:0006790 sulfur compound metabolic process 30.36% (17/56) 3.38 0.0 0.0
GO:0010035 response to inorganic substance 48.21% (27/56) 2.29 0.0 0.0
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 21.43% (12/56) 4.38 0.0 0.0
GO:0009404 toxin metabolic process 17.86% (10/56) 4.97 0.0 0.0
GO:0006575 cellular modified amino acid metabolic process 17.86% (10/56) 4.95 0.0 0.0
GO:0070301 cellular response to hydrogen peroxide 14.29% (8/56) 5.83 0.0 0.0
GO:0016138 glycoside biosynthetic process 17.86% (10/56) 4.85 0.0 0.0
GO:0042214 terpene metabolic process 21.43% (12/56) 4.08 0.0 0.0
GO:0009636 response to toxic substance 17.86% (10/56) 4.58 0.0 0.0
GO:0008152 metabolic process 83.93% (47/56) 1.08 0.0 0.0
GO:0031668 cellular response to extracellular stimulus 26.79% (15/56) 3.32 0.0 0.0
GO:0010030 positive regulation of seed germination 14.29% (8/56) 5.4 0.0 0.0
GO:0034614 cellular response to reactive oxygen species 14.29% (8/56) 5.36 0.0 0.0
GO:0071496 cellular response to external stimulus 26.79% (15/56) 3.25 0.0 0.0
GO:0046686 response to cadmium ion 25.0% (14/56) 3.43 0.0 0.0
GO:0009696 salicylic acid metabolic process 14.29% (8/56) 5.27 0.0 0.0
GO:0046278 3,4-dihydroxybenzoate metabolic process 8.93% (5/56) 7.6 0.0 0.0
GO:0047891 flavone 7-O-beta-glucosyltransferase activity 8.93% (5/56) 7.6 0.0 0.0
GO:0047913 gallate 1-beta-glucosyltransferase activity 8.93% (5/56) 7.6 0.0 0.0
GO:0050412 cinnamate beta-D-glucosyltransferase activity 8.93% (5/56) 7.6 0.0 0.0
GO:0071704 organic substance metabolic process 80.36% (45/56) 1.12 0.0 0.0
GO:0007154 cell communication 28.57% (16/56) 3.05 0.0 0.0
GO:2000070 regulation of response to water deprivation 17.86% (10/56) 4.4 0.0 0.0
GO:0042277 peptide binding 17.86% (10/56) 4.38 0.0 0.0
GO:0034599 cellular response to oxidative stress 16.07% (9/56) 4.74 0.0 0.0
GO:0002238 response to molecule of fungal origin 19.64% (11/56) 3.99 0.0 0.0
GO:0071472 cellular response to salt stress 14.29% (8/56) 5.11 0.0 0.0
GO:0050284 sinapate 1-glucosyltransferase activity 8.93% (5/56) 7.38 0.0 0.0
GO:0080043 quercetin 3-O-glucosyltransferase activity 14.29% (8/56) 5.07 0.0 0.0
GO:2000030 regulation of response to red or far red light 16.07% (9/56) 4.61 0.0 0.0
GO:0009801 cinnamic acid ester metabolic process 8.93% (5/56) 7.31 0.0 0.0
GO:0071214 cellular response to abiotic stimulus 25.0% (14/56) 3.25 0.0 0.0
GO:0104004 cellular response to environmental stimulus 25.0% (14/56) 3.25 0.0 0.0
GO:0009991 response to extracellular stimulus 28.57% (16/56) 2.92 0.0 0.0
GO:0120252 hydrocarbon metabolic process 21.43% (12/56) 3.61 0.0 0.0
GO:0050896 response to stimulus 80.36% (45/56) 1.05 0.0 0.0
GO:0010016 shoot system morphogenesis 14.29% (8/56) 4.92 0.0 0.0
GO:0033218 amide binding 17.86% (10/56) 4.12 0.0 0.0
GO:0009850 auxin metabolic process 14.29% (8/56) 4.85 0.0 0.0
GO:0009835 fruit ripening 14.29% (8/56) 4.82 0.0 0.0
GO:0033494 ferulate metabolic process 8.93% (5/56) 6.96 0.0 0.0
GO:0047834 D-threo-aldose 1-dehydrogenase activity 8.93% (5/56) 6.91 0.0 0.0
GO:0042538 hyperosmotic salinity response 16.07% (9/56) 4.34 0.0 0.0
GO:0019748 secondary metabolic process 30.36% (17/56) 2.64 0.0 0.0
GO:0046246 terpene biosynthetic process 17.86% (10/56) 3.93 0.0 0.0
GO:0008150 biological_process 96.43% (54/56) 0.65 0.0 0.0
GO:0009072 aromatic amino acid family metabolic process 14.29% (8/56) 4.65 0.0 0.0
GO:1901659 glycosyl compound biosynthetic process 17.86% (10/56) 3.91 0.0 0.0
GO:0009712 catechol-containing compound metabolic process 8.93% (5/56) 6.64 0.0 0.0
GO:0003674 molecular_function 94.64% (53/56) 0.66 0.0 0.0
GO:0044255 cellular lipid metabolic process 32.14% (18/56) 2.39 0.0 0.0
GO:0071470 cellular response to osmotic stress 14.29% (8/56) 4.4 0.0 0.0
GO:1901657 glycosyl compound metabolic process 21.43% (12/56) 3.22 0.0 0.0
GO:0006720 isoprenoid metabolic process 23.21% (13/56) 3.03 0.0 0.0
GO:0009751 response to salicylic acid 21.43% (12/56) 3.19 0.0 0.0
GO:0009629 response to gravity 16.07% (9/56) 3.97 0.0 0.0
GO:0006972 hyperosmotic response 16.07% (9/56) 3.96 0.0 0.0
GO:0010038 response to metal ion 26.79% (15/56) 2.67 0.0 0.0
GO:1901701 cellular response to oxygen-containing compound 25.0% (14/56) 2.81 0.0 0.0
GO:1901615 organic hydroxy compound metabolic process 23.21% (13/56) 2.97 0.0 0.0
GO:0009734 auxin-activated signaling pathway 16.07% (9/56) 3.91 0.0 0.0
GO:0006629 lipid metabolic process 33.93% (19/56) 2.17 0.0 0.0
GO:0018958 phenol-containing compound metabolic process 14.29% (8/56) 4.21 0.0 0.0
GO:0000302 response to reactive oxygen species 19.64% (11/56) 3.3 0.0 0.0
GO:0009605 response to external stimulus 53.57% (30/56) 1.43 0.0 0.0
GO:0120251 hydrocarbon biosynthetic process 17.86% (10/56) 3.44 0.0 0.0
GO:0032787 monocarboxylic acid metabolic process 25.0% (14/56) 2.66 0.0 0.0
GO:0110165 cellular anatomical entity 92.86% (52/56) 0.63 0.0 0.0
GO:0080044 quercetin 7-O-glucosyltransferase activity 10.71% (6/56) 5.0 0.0 0.0
GO:0062197 cellular response to chemical stress 16.07% (9/56) 3.65 0.0 0.0
GO:0042430 indole-containing compound metabolic process 14.29% (8/56) 3.98 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 55.36% (31/56) 1.35 0.0 0.0
GO:0044237 cellular metabolic process 69.64% (39/56) 1.04 0.0 0.0
GO:0006518 peptide metabolic process 17.86% (10/56) 3.32 0.0 0.0
GO:0019439 aromatic compound catabolic process 17.86% (10/56) 3.32 0.0 0.0
GO:0005575 cellular_component 92.86% (52/56) 0.61 0.0 1e-06
GO:0019752 carboxylic acid metabolic process 28.57% (16/56) 2.3 0.0 1e-06
GO:0048583 regulation of response to stimulus 42.86% (24/56) 1.66 0.0 1e-06
GO:0070887 cellular response to chemical stimulus 32.14% (18/56) 2.1 0.0 1e-06
GO:0043168 anion binding 33.93% (19/56) 2.0 0.0 1e-06
GO:0010181 FMN binding 8.93% (5/56) 5.5 0.0 1e-06
GO:0018904 ether metabolic process 8.93% (5/56) 5.48 0.0 1e-06
GO:0042542 response to hydrogen peroxide 14.29% (8/56) 3.79 0.0 1e-06
GO:1901361 organic cyclic compound catabolic process 17.86% (10/56) 3.19 0.0 1e-06
GO:0009414 response to water deprivation 25.0% (14/56) 2.46 0.0 1e-06
GO:0008610 lipid biosynthetic process 25.0% (14/56) 2.42 0.0 2e-06
GO:0009415 response to water 25.0% (14/56) 2.4 0.0 2e-06
GO:0010033 response to organic substance 48.21% (27/56) 1.41 0.0 2e-06
GO:0042445 hormone metabolic process 16.07% (9/56) 3.28 0.0 3e-06
GO:0071695 anatomical structure maturation 14.29% (8/56) 3.56 0.0 3e-06
GO:1901137 carbohydrate derivative biosynthetic process 17.86% (10/56) 2.99 0.0 3e-06
GO:0048582 positive regulation of post-embryonic development 14.29% (8/56) 3.51 0.0 4e-06
GO:0001101 response to acid chemical 25.0% (14/56) 2.31 1e-06 4e-06
GO:0009787 regulation of abscisic acid-activated signaling pathway 16.07% (9/56) 3.19 1e-06 4e-06
GO:0010029 regulation of seed germination 14.29% (8/56) 3.48 1e-06 4e-06
GO:1901419 regulation of response to alcohol 16.07% (9/56) 3.19 1e-06 4e-06
GO:1905957 regulation of cellular response to alcohol 16.07% (9/56) 3.19 1e-06 4e-06
GO:0043436 oxoacid metabolic process 28.57% (16/56) 2.07 1e-06 4e-06
GO:0014070 response to organic cyclic compound 25.0% (14/56) 2.28 1e-06 4e-06
GO:0009812 flavonoid metabolic process 14.29% (8/56) 3.41 1e-06 6e-06
GO:0008299 isoprenoid biosynthetic process 17.86% (10/56) 2.89 1e-06 6e-06
GO:1900140 regulation of seedling development 14.29% (8/56) 3.35 1e-06 8e-06
GO:0006950 response to stress 58.93% (33/56) 1.07 1e-06 9e-06
GO:0006082 organic acid metabolic process 28.57% (16/56) 1.99 1e-06 9e-06
GO:0009651 response to salt stress 23.21% (13/56) 2.29 2e-06 1.2e-05
GO:0021700 developmental maturation 14.29% (8/56) 3.24 2e-06 1.3e-05
GO:0052873 FMN reductase (NADPH) activity 3.57% (2/56) 9.45 2e-06 1.3e-05
GO:0052482 defense response by cell wall thickening 8.93% (5/56) 4.61 2e-06 1.3e-05
GO:0052544 defense response by callose deposition in cell wall 8.93% (5/56) 4.61 2e-06 1.3e-05
GO:0048585 negative regulation of response to stimulus 25.0% (14/56) 2.14 2e-06 1.4e-05
GO:0043603 cellular amide metabolic process 17.86% (10/56) 2.73 2e-06 1.4e-05
GO:0080018 anthocyanin 5-O-glucosyltransferase activity 5.36% (3/56) 6.86 2e-06 1.5e-05
GO:1901700 response to oxygen-containing compound 42.86% (24/56) 1.39 2e-06 1.6e-05
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 12.5% (7/56) 3.51 3e-06 1.7e-05
GO:0004033 aldo-keto reductase (NADP) activity 7.14% (4/56) 5.34 3e-06 1.9e-05
GO:0044281 small molecule metabolic process 32.14% (18/56) 1.71 4e-06 2.3e-05
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 8.93% (5/56) 4.42 4e-06 2.4e-05
GO:0044248 cellular catabolic process 26.79% (15/56) 1.96 4e-06 2.5e-05
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 12.5% (7/56) 3.4 4e-06 2.8e-05
GO:0016629 12-oxophytodienoate reductase activity 5.36% (3/56) 6.51 5e-06 3e-05
GO:0052543 callose deposition in cell wall 8.93% (5/56) 4.33 5e-06 3.2e-05
GO:0008987 quinolinate synthetase A activity 3.57% (2/56) 8.86 6e-06 3.7e-05
GO:1901135 carbohydrate derivative metabolic process 21.43% (12/56) 2.23 7e-06 4e-05
GO:0098869 cellular oxidant detoxification 8.93% (5/56) 4.25 7e-06 4.1e-05
GO:0034641 cellular nitrogen compound metabolic process 37.5% (21/56) 1.46 7e-06 4.2e-05
GO:0052386 cell wall thickening 8.93% (5/56) 4.24 7e-06 4.2e-05
GO:1901576 organic substance biosynthetic process 39.29% (22/56) 1.4 7e-06 4.3e-05
GO:0052542 defense response by callose deposition 8.93% (5/56) 4.21 8e-06 4.5e-05
GO:0006725 cellular aromatic compound metabolic process 39.29% (22/56) 1.38 9e-06 5.4e-05
GO:1901360 organic cyclic compound metabolic process 41.07% (23/56) 1.31 1.1e-05 6.6e-05
GO:0009987 cellular process 80.36% (45/56) 0.62 1.2e-05 6.8e-05
GO:0009628 response to abiotic stimulus 44.64% (25/56) 1.22 1.2e-05 6.9e-05
GO:0047522 15-oxoprostaglandin 13-oxidase activity 3.57% (2/56) 8.45 1.2e-05 6.9e-05
GO:0006520 cellular amino acid metabolic process 14.29% (8/56) 2.86 1.3e-05 7.6e-05
GO:0006970 response to osmotic stress 23.21% (13/56) 2.01 1.4e-05 7.9e-05
GO:0005634 nucleus 37.5% (21/56) 1.4 1.4e-05 7.9e-05
GO:0006807 nitrogen compound metabolic process 55.36% (31/56) 0.99 1.5e-05 8.3e-05
GO:0004601 peroxidase activity 8.93% (5/56) 4.01 1.5e-05 8.5e-05
GO:0120254 olefinic compound metabolic process 10.71% (6/56) 3.48 1.6e-05 9.2e-05
GO:0009058 biosynthetic process 39.29% (22/56) 1.32 1.7e-05 9.6e-05
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 8.93% (5/56) 3.96 1.8e-05 0.0001
GO:0033037 polysaccharide localization 8.93% (5/56) 3.94 1.9e-05 0.000103
GO:0052545 callose localization 8.93% (5/56) 3.94 1.9e-05 0.000103
GO:0016144 S-glycoside biosynthetic process 8.93% (5/56) 3.93 2e-05 0.000106
GO:0019758 glycosinolate biosynthetic process 8.93% (5/56) 3.93 2e-05 0.000106
GO:0019761 glucosinolate biosynthetic process 8.93% (5/56) 3.93 2e-05 0.000106
GO:0055091 phospholipid homeostasis 3.57% (2/56) 8.13 2e-05 0.000107
GO:0051240 positive regulation of multicellular organismal process 16.07% (9/56) 2.55 2e-05 0.000107
GO:1990748 cellular detoxification 8.93% (5/56) 3.83 2.8e-05 0.000147
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 8.93% (5/56) 3.77 3.3e-05 0.000174
GO:0016209 antioxidant activity 8.93% (5/56) 3.73 3.8e-05 0.0002
GO:0033554 cellular response to stress 28.57% (16/56) 1.59 4.2e-05 0.000218
GO:0009056 catabolic process 26.79% (15/56) 1.65 4.8e-05 0.00025
GO:0043167 ion binding 41.07% (23/56) 1.18 5.4e-05 0.000277
GO:0051716 cellular response to stimulus 35.71% (20/56) 1.28 8.1e-05 0.000416
GO:0008753 NADPH dehydrogenase (quinone) activity 3.57% (2/56) 7.13 9e-05 0.000457
GO:0070402 NADPH binding 5.36% (3/56) 5.13 9e-05 0.000459
GO:0009507 chloroplast 17.86% (10/56) 2.05 0.000127 0.000643
GO:0009695 jasmonic acid biosynthetic process 5.36% (3/56) 4.84 0.000161 0.000811
GO:0047631 ADP-ribose diphosphatase activity 3.57% (2/56) 6.64 0.000181 0.000908
GO:1901575 organic substance catabolic process 23.21% (13/56) 1.64 0.00019 0.000945
GO:0019899 enzyme binding 19.64% (11/56) 1.84 0.000198 0.000983
GO:0043231 intracellular membrane-bounded organelle 58.93% (33/56) 0.76 0.000205 0.001013
GO:0010817 regulation of hormone levels 16.07% (9/56) 2.1 0.000219 0.001076
GO:0031408 oxylipin biosynthetic process 5.36% (3/56) 4.67 0.000228 0.001113
GO:0035529 NADH pyrophosphatase activity 3.57% (2/56) 6.45 0.000239 0.001162
GO:0048443 stamen development 5.36% (3/56) 4.64 0.000244 0.001184
GO:0031407 oxylipin metabolic process 5.36% (3/56) 4.62 0.000253 0.00122
GO:0043227 membrane-bounded organelle 58.93% (33/56) 0.74 0.00026 0.001249
GO:0009435 NAD biosynthetic process 3.57% (2/56) 6.36 0.00027 0.001292
GO:0009570 chloroplast stroma 12.5% (7/56) 2.45 0.000285 0.001357
GO:0080151 positive regulation of salicylic acid mediated signaling pathway 3.57% (2/56) 6.2 0.000339 0.001606
GO:0009532 plastid stroma 12.5% (7/56) 2.39 0.000357 0.001683
GO:0052579 (+)-pulegone reductase, (+)-isomenthone as substrate, activity 3.57% (2/56) 6.05 0.000416 0.001943
GO:0052580 (+)-pulegone reductase, (-)-menthone as substrate, activity 3.57% (2/56) 6.05 0.000416 0.001943
GO:0004551 dinucleotide phosphatase activity 3.57% (2/56) 5.99 0.000457 0.002125
GO:0032440 2-alkenal reductase [NAD(P)+] activity 3.57% (2/56) 5.92 0.0005 0.002315
GO:0009966 regulation of signal transduction 21.43% (12/56) 1.57 0.000557 0.002568
GO:0006692 prostanoid metabolic process 3.57% (2/56) 5.8 0.000592 0.002705
GO:0006693 prostaglandin metabolic process 3.57% (2/56) 5.8 0.000592 0.002705
GO:0043226 organelle 62.5% (35/56) 0.64 0.000605 0.002752
GO:0048580 regulation of post-embryonic development 16.07% (9/56) 1.88 0.000662 0.002998
GO:0009718 anthocyanin-containing compound biosynthetic process 5.36% (3/56) 4.13 0.000695 0.003132
GO:0009409 response to cold 16.07% (9/56) 1.87 0.000699 0.003138
GO:0016143 S-glycoside metabolic process 8.93% (5/56) 2.79 0.000784 0.003444
GO:0019757 glycosinolate metabolic process 8.93% (5/56) 2.79 0.000784 0.003444
GO:0019760 glucosinolate metabolic process 8.93% (5/56) 2.79 0.000784 0.003444
GO:0043207 response to external biotic stimulus 33.93% (19/56) 1.08 0.000778 0.003476
GO:0051094 positive regulation of developmental process 14.29% (8/56) 2.01 0.000781 0.003476
GO:0019359 nicotinamide nucleotide biosynthetic process 3.57% (2/56) 5.59 0.000798 0.003494
GO:0044272 sulfur compound biosynthetic process 8.93% (5/56) 2.77 0.000819 0.003569
GO:0043473 pigmentation 5.36% (3/56) 4.02 0.000857 0.003718
GO:0009755 hormone-mediated signaling pathway 16.07% (9/56) 1.83 0.000878 0.003794
GO:0009607 response to biotic stimulus 33.93% (19/56) 1.06 0.000959 0.004127
GO:2000008 regulation of protein localization to cell surface 3.57% (2/56) 5.45 0.000973 0.004153
GO:0019363 pyridine nucleotide biosynthetic process 3.57% (2/56) 5.45 0.000973 0.004153
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 3.57% (2/56) 5.4 0.001034 0.004399
GO:0023051 regulation of signaling 21.43% (12/56) 1.46 0.001068 0.004521
GO:0040008 regulation of growth 16.07% (9/56) 1.78 0.001105 0.00466
GO:0010646 regulation of cell communication 21.43% (12/56) 1.45 0.001137 0.004775
GO:0048519 negative regulation of biological process 32.14% (18/56) 1.07 0.001283 0.005303
GO:0046496 nicotinamide nucleotide metabolic process 5.36% (3/56) 3.82 0.001273 0.005304
GO:0044249 cellular biosynthetic process 30.36% (17/56) 1.11 0.001269 0.00531
GO:0080134 regulation of response to stress 21.43% (12/56) 1.43 0.001282 0.005323
GO:0019362 pyridine nucleotide metabolic process 5.36% (3/56) 3.8 0.001323 0.005448
GO:0043229 intracellular organelle 60.71% (34/56) 0.6 0.001338 0.005487
GO:0031162 sulfur incorporation into metallo-sulfur cluster 1.79% (1/56) 9.45 0.001433 0.005786
GO:0044224 juxtaparanode region of axon 1.79% (1/56) 9.45 0.001433 0.005786
GO:0060539 diaphragm development 1.79% (1/56) 9.45 0.001433 0.005786
GO:1990031 pinceau fiber 1.79% (1/56) 9.45 0.001433 0.005786
GO:0046283 anthocyanin-containing compound metabolic process 5.36% (3/56) 3.75 0.00148 0.005932
GO:0009536 plastid 17.86% (10/56) 1.6 0.001477 0.005942
GO:0044238 primary metabolic process 51.79% (29/56) 0.7 0.00154 0.006148
GO:0042545 cell wall modification 8.93% (5/56) 2.56 0.001572 0.006253
GO:0060416 response to growth hormone 3.57% (2/56) 5.09 0.001595 0.006295
GO:0046148 pigment biosynthetic process 7.14% (4/56) 3.0 0.001592 0.006306
GO:0072525 pyridine-containing compound biosynthetic process 3.57% (2/56) 5.05 0.001673 0.006579
GO:0072524 pyridine-containing compound metabolic process 5.36% (3/56) 3.61 0.001956 0.007661
GO:0050794 regulation of cellular process 48.21% (27/56) 0.72 0.002029 0.007918
GO:0050661 NADP binding 5.36% (3/56) 3.53 0.00226 0.008789
GO:0050275 scopoletin glucosyltransferase activity 3.57% (2/56) 4.8 0.002363 0.009154
GO:0080046 quercetin 4'-O-glucosyltransferase activity 3.57% (2/56) 4.77 0.002457 0.009484
GO:0009694 jasmonic acid metabolic process 5.36% (3/56) 3.48 0.002517 0.009678
GO:0051176 positive regulation of sulfur metabolic process 3.57% (2/56) 4.75 0.002553 0.009782
GO:0032461 positive regulation of protein oligomerization 1.79% (1/56) 8.45 0.002863 0.010812
GO:0032464 positive regulation of protein homooligomerization 1.79% (1/56) 8.45 0.002863 0.010812
GO:0120019 phosphatidylcholine transfer activity 1.79% (1/56) 8.45 0.002863 0.010812
GO:0097163 sulfur carrier activity 1.79% (1/56) 8.45 0.002863 0.010812
GO:0009813 flavonoid biosynthetic process 7.14% (4/56) 2.76 0.002925 0.011007
GO:0010193 response to ozone 5.36% (3/56) 3.37 0.003125 0.011714
GO:2000026 regulation of multicellular organismal development 16.07% (9/56) 1.55 0.003305 0.012346
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 3.57% (2/56) 4.54 0.003383 0.012593
GO:0016226 iron-sulfur cluster assembly 3.57% (2/56) 4.49 0.003608 0.013334
GO:0031163 metallo-sulfur cluster assembly 3.57% (2/56) 4.49 0.003608 0.013334
GO:0050789 regulation of biological process 51.79% (29/56) 0.63 0.00368 0.013554
GO:0009704 de-etiolation 3.57% (2/56) 4.47 0.003723 0.013662
GO:0065008 regulation of biological quality 25.0% (14/56) 1.11 0.003832 0.014016
GO:0042440 pigment metabolic process 7.14% (4/56) 2.64 0.003877 0.014132
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 3.57% (2/56) 4.42 0.003957 0.014323
GO:0050136 NADH dehydrogenase (quinone) activity 3.57% (2/56) 4.42 0.003957 0.014323
GO:0097233 alveolar lamellar body membrane 1.79% (1/56) 7.86 0.004292 0.015116
GO:0008076 voltage-gated potassium channel complex 1.79% (1/56) 7.86 0.004292 0.015116
GO:0045445 myoblast differentiation 1.79% (1/56) 7.86 0.004292 0.015116
GO:0060538 skeletal muscle organ development 1.79% (1/56) 7.86 0.004292 0.015116
GO:1902259 regulation of delayed rectifier potassium channel activity 1.79% (1/56) 7.86 0.004292 0.015116
GO:1902260 negative regulation of delayed rectifier potassium channel activity 1.79% (1/56) 7.86 0.004292 0.015116
GO:1903817 negative regulation of voltage-gated potassium channel activity 1.79% (1/56) 7.86 0.004292 0.015116
GO:0003954 NADH dehydrogenase activity 3.57% (2/56) 4.38 0.004199 0.015145
GO:0051239 regulation of multicellular organismal process 19.64% (11/56) 1.29 0.004478 0.015717
GO:0070727 cellular macromolecule localization 14.29% (8/56) 1.59 0.004757 0.016643
GO:0009743 response to carbohydrate 8.93% (5/56) 2.18 0.004832 0.016848
GO:0009698 phenylpropanoid metabolic process 10.71% (6/56) 1.92 0.004972 0.017276
GO:0009941 chloroplast envelope 8.93% (5/56) 2.13 0.005669 0.019637
GO:0006631 fatty acid metabolic process 8.93% (5/56) 2.13 0.005699 0.019674
GO:0005515 protein binding 55.36% (31/56) 0.55 0.005829 0.020055
GO:0033744 L-methionine:thioredoxin-disulfide S-oxidoreductase activity 1.79% (1/56) 7.13 0.007143 0.023204
GO:0036456 L-methionine-(S)-S-oxide reductase activity 1.79% (1/56) 7.13 0.007143 0.023204
GO:0030226 apolipoprotein receptor activity 1.79% (1/56) 7.13 0.007143 0.023204
GO:0032459 regulation of protein oligomerization 1.79% (1/56) 7.13 0.007143 0.023204
GO:0032462 regulation of protein homooligomerization 1.79% (1/56) 7.13 0.007143 0.023204
GO:0034188 apolipoprotein A-I receptor activity 1.79% (1/56) 7.13 0.007143 0.023204
GO:0038027 apolipoprotein A-I-mediated signaling pathway 1.79% (1/56) 7.13 0.007143 0.023204
GO:0043129 surfactant homeostasis 1.79% (1/56) 7.13 0.007143 0.023204
GO:0048875 chemical homeostasis within a tissue 1.79% (1/56) 7.13 0.007143 0.023204
GO:1900223 positive regulation of amyloid-beta clearance 1.79% (1/56) 7.13 0.007143 0.023204
GO:1901074 regulation of engulfment of apoptotic cell 1.79% (1/56) 7.13 0.007143 0.023204
GO:1901076 positive regulation of engulfment of apoptotic cell 1.79% (1/56) 7.13 0.007143 0.023204
GO:1902994 regulation of phospholipid efflux 1.79% (1/56) 7.13 0.007143 0.023204
GO:1902995 positive regulation of phospholipid efflux 1.79% (1/56) 7.13 0.007143 0.023204
GO:1903897 regulation of PERK-mediated unfolded protein response 1.79% (1/56) 7.13 0.007143 0.023204
GO:1903898 negative regulation of PERK-mediated unfolded protein response 1.79% (1/56) 7.13 0.007143 0.023204
GO:0005886 plasma membrane 26.79% (15/56) 0.97 0.006896 0.02365
GO:0065007 biological regulation 53.57% (30/56) 0.55 0.007324 0.023718
GO:0009526 plastid envelope 8.93% (5/56) 2.05 0.007076 0.024189
GO:0006805 xenobiotic metabolic process 3.57% (2/56) 3.92 0.00777 0.025084
GO:0005777 peroxisome 7.14% (4/56) 2.35 0.007847 0.025255
GO:0009524 phragmoplast 5.36% (3/56) 2.87 0.00815 0.02615
GO:0008113 peptide-methionine (S)-S-oxide reductase activity 1.79% (1/56) 6.86 0.008566 0.027234
GO:0150094 amyloid-beta clearance by cellular catabolic process 1.79% (1/56) 6.86 0.008566 0.027234
GO:1900221 regulation of amyloid-beta clearance 1.79% (1/56) 6.86 0.008566 0.027234
GO:0033036 macromolecule localization 14.29% (8/56) 1.43 0.009002 0.028535
GO:0009266 response to temperature stimulus 16.07% (9/56) 1.32 0.009092 0.028732
GO:0033559 unsaturated fatty acid metabolic process 3.57% (2/56) 3.8 0.009121 0.028737
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 3.57% (2/56) 3.79 0.009297 0.029203
GO:0000166 nucleotide binding 21.43% (12/56) 1.08 0.009445 0.02949
GO:1901265 nucleoside phosphate binding 21.43% (12/56) 1.08 0.009445 0.02949
GO:0030667 secretory granule membrane 3.57% (2/56) 3.76 0.009653 0.030051
GO:0010875 positive regulation of cholesterol efflux 1.79% (1/56) 6.64 0.009986 0.030103
GO:0018149 peptide cross-linking 1.79% (1/56) 6.64 0.009986 0.030103
GO:0042984 regulation of amyloid precursor protein biosynthetic process 1.79% (1/56) 6.64 0.009986 0.030103
GO:0042985 negative regulation of amyloid precursor protein biosynthetic process 1.79% (1/56) 6.64 0.009986 0.030103
GO:0044857 plasma membrane raft organization 1.79% (1/56) 6.64 0.009986 0.030103
GO:1902430 negative regulation of amyloid-beta formation 1.79% (1/56) 6.64 0.009986 0.030103
GO:2000425 regulation of apoptotic cell clearance 1.79% (1/56) 6.64 0.009986 0.030103
GO:2000427 positive regulation of apoptotic cell clearance 1.79% (1/56) 6.64 0.009986 0.030103
GO:1901483 regulation of transcription factor catabolic process 1.79% (1/56) 6.64 0.009986 0.030103
GO:1901485 positive regulation of transcription factor catabolic process 1.79% (1/56) 6.64 0.009986 0.030103
GO:0042802 identical protein binding 17.86% (10/56) 1.21 0.00976 0.030294
GO:0010959 regulation of metal ion transport 5.36% (3/56) 2.73 0.010577 0.031793
GO:0009820 alkaloid metabolic process 7.14% (4/56) 2.22 0.010756 0.032236
GO:0010561 negative regulation of glycoprotein biosynthetic process 1.79% (1/56) 6.45 0.011405 0.03351
GO:0097232 lamellar body membrane 1.79% (1/56) 6.45 0.011405 0.03351
GO:1902992 negative regulation of amyloid precursor protein catabolic process 1.79% (1/56) 6.45 0.011405 0.03351
GO:1903019 negative regulation of glycoprotein metabolic process 1.79% (1/56) 6.45 0.011405 0.03351
GO:0098711 iron ion import across plasma membrane 1.79% (1/56) 6.45 0.011405 0.03351
GO:0055090 acylglycerol homeostasis 1.79% (1/56) 6.45 0.011405 0.03351
GO:0070328 triglyceride homeostasis 1.79% (1/56) 6.45 0.011405 0.03351
GO:0051539 4 iron, 4 sulfur cluster binding 3.57% (2/56) 3.59 0.012112 0.035489
GO:0048046 apoplast 8.93% (5/56) 1.85 0.01238 0.036171
GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity 1.79% (1/56) 6.28 0.012822 0.037151
GO:0032839 dendrite cytoplasm 1.79% (1/56) 6.28 0.012822 0.037151
GO:1990635 proximal dendrite 1.79% (1/56) 6.28 0.012822 0.037151
GO:0006633 fatty acid biosynthetic process 5.36% (3/56) 2.61 0.013176 0.038073
GO:0010559 regulation of glycoprotein biosynthetic process 1.79% (1/56) 6.13 0.014236 0.040798
GO:0042597 periplasmic space 1.79% (1/56) 6.13 0.014236 0.040798
GO:0034705 potassium channel complex 1.79% (1/56) 6.13 0.014236 0.040798
GO:0042579 microbody 7.14% (4/56) 2.09 0.014507 0.041459
GO:0009060 aerobic respiration 3.57% (2/56) 3.44 0.014816 0.042228
GO:0010874 regulation of cholesterol efflux 1.79% (1/56) 5.99 0.015649 0.044002
GO:0038024 cargo receptor activity 1.79% (1/56) 5.99 0.015649 0.044002
GO:0036185 13-lipoxin reductase activity 1.79% (1/56) 5.99 0.015649 0.044002
GO:2001300 lipoxin metabolic process 1.79% (1/56) 5.99 0.015649 0.044002
GO:2001302 lipoxin A4 metabolic process 1.79% (1/56) 5.99 0.015649 0.044002
GO:0044550 secondary metabolite biosynthetic process 10.71% (6/56) 1.56 0.015774 0.044234
GO:0051641 cellular localization 14.29% (8/56) 1.27 0.016549 0.046285
GO:0051287 NAD binding 3.57% (2/56) 3.35 0.016597 0.046295
GO:0032373 positive regulation of sterol transport 1.79% (1/56) 5.86 0.01706 0.046959
GO:0032376 positive regulation of cholesterol transport 1.79% (1/56) 5.86 0.01706 0.046959
GO:0097386 glial cell projection 1.79% (1/56) 5.86 0.01706 0.046959
GO:0150172 regulation of phosphatidylcholine metabolic process 1.79% (1/56) 5.86 0.01706 0.046959
GO:0070821 tertiary granule membrane 1.79% (1/56) 5.86 0.01706 0.046959
GO:0048437 floral organ development 5.36% (3/56) 2.46 0.017401 0.047774
GO:0005622 intracellular anatomical structure 7.14% (4/56) 2.0 0.017722 0.048527
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_143 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_185 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_187 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_193 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_204 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_242 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_253 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_266 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_7 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_48 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_86 0.017 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_93 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_106 0.01 Orthogroups with 8 Potato genotypes Compare
Sequences (56) (download table)

InterPro Domains

GO Terms

Family Terms