SOLTUB.AGRIA.G00000001655


Description : DnaJ domain-containing protein


Gene families : OG_02_0021616 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000001655
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_124


Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
MF GO:0001671 ATPase activator activity IEA AHRD
CC GO:0005654 nucleoplasm IEA AHRD
CC GO:0005730 nucleolus IEA AHRD
CC GO:0005789 endoplasmic reticulum membrane IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005886 plasma membrane IEA AHRD
BP GO:0006986 response to unfolded protein IEA AHRD
MF GO:0008134 transcription factor binding IEA AHRD
BP GO:0009408 response to heat IEA AHRD
CC GO:0016021 integral component of membrane IEA AHRD
BP GO:0030433 ubiquitin-dependent ERAD pathway IEA AHRD
MF GO:0030544 Hsp70 protein binding IEA AHRD
BP GO:0042691 positive regulation of crystal cell differentiation IEA AHRD
MF GO:0043167 ion binding IEA AHRD
BP GO:0050821 protein stabilization IEA AHRD
MF GO:0051082 unfolded protein binding IEA AHRD
BP GO:0051085 chaperone cofactor-dependent protein refolding IEA AHRD
MF GO:0051087 chaperone binding IEA AHRD
MF GO:0051787 misfolded protein binding IEA AHRD
BP GO:0071218 cellular response to misfolded protein IEA AHRD
Type GO Term Name Evidence Source
BP GO:0000012 single strand break repair IEP Predict GO terms from Neighborhoods
BP GO:0000077 DNA damage checkpoint signaling IEP Predict GO terms from Neighborhoods
BP GO:0000303 response to superoxide IEP Predict GO terms from Neighborhoods
BP GO:0000305 response to oxygen radical IEP Predict GO terms from Neighborhoods
BP GO:0001207 obsolete histone displacement IEP Predict GO terms from Neighborhoods
BP GO:0001843 neural tube closure IEP Predict GO terms from Neighborhoods
MF GO:0003682 chromatin binding IEP Predict GO terms from Neighborhoods
MF GO:0003725 double-stranded RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005432 calcium:sodium antiporter activity IEP Predict GO terms from Neighborhoods
MF GO:0005521 lamin binding IEP Predict GO terms from Neighborhoods
CC GO:0005652 nuclear lamina IEP Predict GO terms from Neighborhoods
CC GO:0005700 polytene chromosome IEP Predict GO terms from Neighborhoods
BP GO:0006283 transcription-coupled nucleotide-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006289 nucleotide-excision repair IEP Predict GO terms from Neighborhoods
BP GO:0006290 pyrimidine dimer repair IEP Predict GO terms from Neighborhoods
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Predict GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Predict GO terms from Neighborhoods
BP GO:0006362 transcription elongation by RNA polymerase I IEP Predict GO terms from Neighborhoods
BP GO:0006626 protein targeting to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0006814 sodium ion transport IEP Predict GO terms from Neighborhoods
BP GO:0006839 mitochondrial transport IEP Predict GO terms from Neighborhoods
BP GO:0006851 mitochondrial calcium ion transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0006996 organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0007000 nucleolus organization IEP Predict GO terms from Neighborhoods
BP GO:0007060 male meiosis chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0007127 meiosis I IEP Predict GO terms from Neighborhoods
BP GO:0007140 male meiotic nuclear division IEP Predict GO terms from Neighborhoods
BP GO:0007141 male meiosis I IEP Predict GO terms from Neighborhoods
BP GO:0007254 JNK cascade IEP Predict GO terms from Neighborhoods
BP GO:0007517 muscle organ development IEP Predict GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Predict GO terms from Neighborhoods
BP GO:0008544 epidermis development IEP Predict GO terms from Neighborhoods
BP GO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0009616 RNAi-mediated antiviral immune response IEP Predict GO terms from Neighborhoods
BP GO:0010032 meiotic chromosome condensation IEP Predict GO terms from Neighborhoods
BP GO:0010165 response to X-ray IEP Predict GO terms from Neighborhoods
BP GO:0010216 maintenance of DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0010267 ta-siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0010332 response to gamma radiation IEP Predict GO terms from Neighborhoods
BP GO:0010507 negative regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0010564 regulation of cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0010569 regulation of double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0010594 regulation of endothelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010596 negative regulation of endothelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010632 regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010633 negative regulation of epithelial cell migration IEP Predict GO terms from Neighborhoods
BP GO:0010955 negative regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0014013 regulation of gliogenesis IEP Predict GO terms from Neighborhoods
BP GO:0014706 striated muscle tissue development IEP Predict GO terms from Neighborhoods
MF GO:0015081 sodium ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015368 calcium:cation antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:0016241 regulation of macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016242 negative regulation of macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016578 histone deubiquitination IEP Predict GO terms from Neighborhoods
CC GO:0016604 nuclear body IEP Predict GO terms from Neighborhoods
CC GO:0016607 nuclear speck IEP Predict GO terms from Neighborhoods
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
MF GO:0019209 kinase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0022402 cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0022414 reproductive process IEP Predict GO terms from Neighborhoods
CC GO:0030017 sarcomere IEP Predict GO terms from Neighborhoods
BP GO:0030261 chromosome condensation IEP Predict GO terms from Neighborhoods
MF GO:0030295 protein kinase activator activity IEP Predict GO terms from Neighborhoods
MF GO:0030296 protein tyrosine kinase activator activity IEP Predict GO terms from Neighborhoods
BP GO:0030334 regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030336 negative regulation of cell migration IEP Predict GO terms from Neighborhoods
BP GO:0030422 siRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0031063 regulation of histone deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0031064 negative regulation of histone deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0031098 stress-activated protein kinase signaling cascade IEP Predict GO terms from Neighborhoods
BP GO:0031344 regulation of cell projection organization IEP Predict GO terms from Neighborhoods
MF GO:0031493 obsolete nucleosomal histone binding IEP Predict GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Predict GO terms from Neighborhoods
MF GO:0032029 myosin tail binding IEP Predict GO terms from Neighborhoods
MF GO:0032036 myosin heavy chain binding IEP Predict GO terms from Neighborhoods
BP GO:0032387 negative regulation of intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0032786 positive regulation of DNA-templated transcription, elongation IEP Predict GO terms from Neighborhoods
BP GO:0032880 regulation of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0034260 negative regulation of GTPase activity IEP Predict GO terms from Neighborhoods
BP GO:0035148 tube formation IEP Predict GO terms from Neighborhoods
BP GO:0035195 miRNA-mediated gene silencing IEP Predict GO terms from Neighborhoods
BP GO:0035264 multicellular organism growth IEP Predict GO terms from Neighborhoods
BP GO:0035825 homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:0039531 regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039533 regulation of MDA-5 signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039535 regulation of RIG-I signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0040012 regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0040013 negative regulation of locomotion IEP Predict GO terms from Neighborhoods
BP GO:0042026 protein refolding IEP Predict GO terms from Neighborhoods
BP GO:0042981 regulation of apoptotic process IEP Predict GO terms from Neighborhoods
BP GO:0043157 response to cation stress IEP Predict GO terms from Neighborhoods
BP GO:0043547 positive regulation of GTPase activity IEP Predict GO terms from Neighborhoods
BP GO:0044087 regulation of cellular component biogenesis IEP Predict GO terms from Neighborhoods
BP GO:0045132 meiotic chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0045494 photoreceptor cell maintenance IEP Predict GO terms from Neighborhoods
BP GO:0045738 negative regulation of DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0045739 positive regulation of DNA repair IEP Predict GO terms from Neighborhoods
BP GO:0045911 positive regulation of DNA recombination IEP Predict GO terms from Neighborhoods
MF GO:0047485 protein N-terminus binding IEP Predict GO terms from Neighborhoods
BP GO:0048608 reproductive structure development IEP Predict GO terms from Neighborhoods
BP GO:0050688 regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0050691 regulation of defense response to virus by host IEP Predict GO terms from Neighborhoods
BP GO:0050920 regulation of chemotaxis IEP Predict GO terms from Neighborhoods
BP GO:0051037 regulation of transcription involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051039 positive regulation of transcription involved in meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0051209 release of sequestered calcium ion into cytosol IEP Predict GO terms from Neighborhoods
BP GO:0051214 RNAi-mediated antiviral immunity against RNA virus IEP Predict GO terms from Neighborhoods
BP GO:0051223 regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051224 negative regulation of protein transport IEP Predict GO terms from Neighborhoods
BP GO:0051282 regulation of sequestering of calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051283 negative regulation of sequestering of calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051299 centrosome separation IEP Predict GO terms from Neighborhoods
BP GO:0051301 cell division IEP Predict GO terms from Neighborhoods
BP GO:0051403 stress-activated MAPK cascade IEP Predict GO terms from Neighborhoods
BP GO:0060260 regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0060261 positive regulation of transcription initiation by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0060341 regulation of cellular localization IEP Predict GO terms from Neighborhoods
BP GO:0060491 regulation of cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0060537 muscle tissue development IEP Predict GO terms from Neighborhoods
BP GO:0060538 skeletal muscle organ development IEP Predict GO terms from Neighborhoods
BP GO:0060606 tube closure IEP Predict GO terms from Neighborhoods
BP GO:0061061 muscle structure development IEP Predict GO terms from Neighborhoods
BP GO:0061982 meiosis I cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:0062207 regulation of pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0062208 positive regulation of pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0070063 RNA polymerase binding IEP Predict GO terms from Neighborhoods
BP GO:0070201 regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:0070536 protein K63-linked deubiquitination IEP Predict GO terms from Neighborhoods
MF GO:0070577 lysine-acetylated histone binding IEP Predict GO terms from Neighborhoods
BP GO:0070585 protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
BP GO:0070613 regulation of protein processing IEP Predict GO terms from Neighborhoods
BP GO:0071108 protein K48-linked deubiquitination IEP Predict GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Predict GO terms from Neighborhoods
BP GO:0071763 nuclear membrane organization IEP Predict GO terms from Neighborhoods
BP GO:0071947 protein deubiquitination involved in ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072359 circulatory system development IEP Predict GO terms from Neighborhoods
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predict GO terms from Neighborhoods
MF GO:0080115 myosin XI tail binding IEP Predict GO terms from Neighborhoods
BP GO:0090083 regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0090084 negative regulation of inclusion body assembly IEP Predict GO terms from Neighborhoods
BP GO:0090311 regulation of protein deacetylation IEP Predict GO terms from Neighborhoods
BP GO:0090313 regulation of protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0090315 negative regulation of protein targeting to membrane IEP Predict GO terms from Neighborhoods
BP GO:0090317 negative regulation of intracellular protein transport IEP Predict GO terms from Neighborhoods
CC GO:0090734 site of DNA damage IEP Predict GO terms from Neighborhoods
BP GO:0097193 intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
CC GO:0097255 R2TP complex IEP Predict GO terms from Neighborhoods
BP GO:0097553 calcium ion transmembrane import into cytosol IEP Predict GO terms from Neighborhoods
BP GO:0097680 double-strand break repair via classical nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:0098813 nuclear chromosome segregation IEP Predict GO terms from Neighborhoods
BP GO:0099093 calcium export from the mitochondrion IEP Predict GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0110030 regulation of G2/MI transition of meiotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0120032 regulation of plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120035 regulation of plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
MF GO:0140033 acetylation-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP Predict GO terms from Neighborhoods
BP GO:1900027 regulation of ruffle assembly IEP Predict GO terms from Neighborhoods
BP GO:1900245 positive regulation of MDA-5 signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900246 positive regulation of RIG-I signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901987 regulation of cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1901993 regulation of meiotic cell cycle phase transition IEP Predict GO terms from Neighborhoods
BP GO:1902347 response to strigolactone IEP Predict GO terms from Neighborhoods
BP GO:1902667 regulation of axon guidance IEP Predict GO terms from Neighborhoods
BP GO:1903046 meiotic cell cycle process IEP Predict GO terms from Neighborhoods
BP GO:1903317 regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903318 negative regulation of protein maturation IEP Predict GO terms from Neighborhoods
BP GO:1903533 regulation of protein targeting IEP Predict GO terms from Neighborhoods
BP GO:1904950 negative regulation of establishment of protein localization IEP Predict GO terms from Neighborhoods
BP GO:1905168 positive regulation of double-strand break repair via homologous recombination IEP Predict GO terms from Neighborhoods
BP GO:1905476 negative regulation of protein localization to membrane IEP Predict GO terms from Neighborhoods
BP GO:1905815 regulation of dorsal/ventral axon guidance IEP Predict GO terms from Neighborhoods
BP GO:2000142 regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000144 positive regulation of DNA-templated transcription initiation IEP Predict GO terms from Neighborhoods
BP GO:2000145 regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2000146 negative regulation of cell motility IEP Predict GO terms from Neighborhoods
BP GO:2000232 regulation of rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:2000779 regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2000780 negative regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2000781 positive regulation of double-strand break repair IEP Predict GO terms from Neighborhoods
BP GO:2001021 negative regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:2001022 positive regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:2001032 regulation of double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
BP GO:2001033 negative regulation of double-strand break repair via nonhomologous end joining IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR024593 DUF3444 503 706
IPR036869 J_dom_sf 61 126
IPR001623 DnaJ_domain 66 127
No external refs found!