SOLTUB.AGRIA.G00000022241

Description : Disease resistance protein (TIR-NBS-LRR class)

Gene families : OG_02_0000170 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022241
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_124

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003953	NAD+ nucleosidase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	AHRD
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	AHRD
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	IEA	AHRD
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0007165	signal transduction	IEA	AHRD
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	IEA	AHRD
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010942	positive regulation of cell death	None	Extended
CC	GO:0012505	endomembrane system	IEA	AHRD
CC	GO:0016020	membrane	IEA	AHRD
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043068	positive regulation of programmed cell death	IEA	AHRD
BP	GO:0043207	response to external biotic stimulus	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	IEA	AHRD
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	IEA	AHRD
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	IEA	AHRD
BP	GO:0098542	defense response to other organism	IEA	AHRD
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	IEA	AHRD
BP	GO:1901564	organonitrogen compound metabolic process	IEA	AHRD
BP	GO:1901700	response to oxygen-containing compound	IEA	AHRD

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Type	GO Term	Name	Evidence	Source
CC	GO:0000118	histone deacetylase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000414	regulation of histone H3-K36 methylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0000792	heterochromatin	IEP	Predict GO terms from Neighborhoods
MF	GO:0001221	transcription coregulator binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0001222	transcription corepressor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0001702	gastrulation with mouth forming second	IEP	Predict GO terms from Neighborhoods
BP	GO:0001817	regulation of cytokine production	IEP	Predict GO terms from Neighborhoods
BP	GO:0001819	positive regulation of cytokine production	IEP	Predict GO terms from Neighborhoods
BP	GO:0002009	morphogenesis of an epithelium	IEP	Predict GO terms from Neighborhoods
BP	GO:0002250	adaptive immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002443	leukocyte mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002449	lymphocyte mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002456	T cell mediated immunity	IEP	Predict GO terms from Neighborhoods
BP	GO:0002458	peripheral T cell tolerance induction	IEP	Predict GO terms from Neighborhoods
BP	GO:0002460	adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains	IEP	Predict GO terms from Neighborhoods
BP	GO:0002461	tolerance induction dependent upon immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0002465	peripheral tolerance induction	IEP	Predict GO terms from Neighborhoods
BP	GO:0002507	tolerance induction	IEP	Predict GO terms from Neighborhoods
BP	GO:0002508	central tolerance induction	IEP	Predict GO terms from Neighborhoods
BP	GO:0002509	central tolerance induction to self antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0002513	tolerance induction to self antigen	IEP	Predict GO terms from Neighborhoods
BP	GO:0002517	T cell tolerance induction	IEP	Predict GO terms from Neighborhoods
BP	GO:0002685	regulation of leukocyte migration	IEP	Predict GO terms from Neighborhoods
MF	GO:0003714	transcription corepressor activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005700	polytene chromosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0006959	humoral immune response	IEP	Predict GO terms from Neighborhoods
BP	GO:0007063	regulation of sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
BP	GO:0007369	gastrulation	IEP	Predict GO terms from Neighborhoods
MF	GO:0008170	N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0008276	protein methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0016580	Sin3 complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0016581	NuRD complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016922	nuclear receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0017015	regulation of transforming growth factor beta receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0017053	transcription repressor complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0021895	cerebral cortex neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0021953	central nervous system neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030182	neuron differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030261	chromosome condensation	IEP	Predict GO terms from Neighborhoods
MF	GO:0030331	nuclear estrogen receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0030336	negative regulation of cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0030510	regulation of BMP signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0030514	negative regulation of BMP signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:0031491	nucleosome binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0032642	regulation of chemokine production	IEP	Predict GO terms from Neighborhoods
BP	GO:0032722	positive regulation of chemokine production	IEP	Predict GO terms from Neighborhoods
CC	GO:0032993	protein-DNA complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0033135	regulation of peptidyl-serine phosphorylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0034708	methyltransferase complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0035064	methylated histone binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0035097	histone methyltransferase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0040013	negative regulation of locomotion	IEP	Predict GO terms from Neighborhoods
MF	GO:0042054	histone methyltransferase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042766	obsolete nucleosome mobilization	IEP	Predict GO terms from Neighborhoods
MF	GO:0042799	histone methyltransferase activity (H4-K20 specific)	IEP	Predict GO terms from Neighborhoods
MF	GO:0042826	histone deacetylase binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0042974	nuclear retinoic acid receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0043383	negative T cell selection	IEP	Predict GO terms from Neighborhoods
BP	GO:0043966	histone H3 acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043967	histone H4 acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045058	T cell selection	IEP	Predict GO terms from Neighborhoods
BP	GO:0045060	negative thymic T cell selection	IEP	Predict GO terms from Neighborhoods
BP	GO:0045061	thymic T cell selection	IEP	Predict GO terms from Neighborhoods
BP	GO:0045875	negative regulation of sister chromatid cohesion	IEP	Predict GO terms from Neighborhoods
MF	GO:0046332	SMAD binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046965	nuclear retinoid X receptor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046966	nuclear thyroid hormone receptor binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0046975	histone methyltransferase activity (H3-K36 specific)	IEP	Predict GO terms from Neighborhoods
MF	GO:0050681	nuclear androgen receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0051101	regulation of DNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0061628	H3K27me3 modified histone binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070410	co-SMAD binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070412	R-SMAD binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0070577	lysine-acetylated histone binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0070603	SWI/SNF superfamily-type complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0070822	Sin3-type complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0071675	regulation of mononuclear cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:0071922	regulation of cohesin loading	IEP	Predict GO terms from Neighborhoods
BP	GO:0071923	negative regulation of cohesin loading	IEP	Predict GO terms from Neighborhoods
BP	GO:0090092	regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090101	negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0090287	regulation of cellular response to growth factor stimulus	IEP	Predict GO terms from Neighborhoods
BP	GO:0090288	negative regulation of cellular response to growth factor stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:0090545	CHD-type complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0097536	thymus epithelium morphogenesis	IEP	Predict GO terms from Neighborhoods
BP	GO:0120186	negative regulation of protein localization to chromatin	IEP	Predict GO terms from Neighborhoods
MF	GO:0140030	modification-dependent protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0140033	acetylation-dependent protein binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0140034	methylation-dependent protein binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1901796	regulation of signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:1901798	positive regulation of signal transduction by p53 class mediator	IEP	Predict GO terms from Neighborhoods
BP	GO:1903025	regulation of RNA polymerase II regulatory region sequence-specific DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:1903828	negative regulation of protein localization	IEP	Predict GO terms from Neighborhoods
BP	GO:1903844	regulation of cellular response to transforming growth factor beta stimulus	IEP	Predict GO terms from Neighborhoods
CC	GO:1904949	ATPase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:1905634	regulation of protein localization to chromatin	IEP	Predict GO terms from Neighborhoods
BP	GO:2000146	negative regulation of cell motility	IEP	Predict GO terms from Neighborhoods
BP	GO:2000401	regulation of lymphocyte migration	IEP	Predict GO terms from Neighborhoods
BP	GO:2000404	regulation of T cell migration	IEP	Predict GO terms from Neighborhoods
BP	GO:2000410	regulation of thymocyte migration	IEP	Predict GO terms from Neighborhoods
BP	GO:2000677	regulation of transcription regulatory region DNA binding	IEP	Predict GO terms from Neighborhoods
BP	GO:2001251	negative regulation of chromosome organization	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR027417	P-loop_NTPase	1030	1284
IPR002182	NB-ARC	1056	1263
IPR002182	NB-ARC	203	422
IPR002182	NB-ARC	584	800
IPR036390	WH_DNA-bd_sf	1261	1360
IPR035897	Toll_tir_struct_dom_sf	8	159
IPR027417	P-loop_NTPase	563	820
IPR036390	WH_DNA-bd_sf	797	899
IPR027417	P-loop_NTPase	192	447
IPR000157	TIR_dom	12	116
IPR036390	WH_DNA-bd_sf	424	526

External Links

No external refs found!

SOLTUB.AGRIA.G00000022241

Expression Profile

Co-expression Networks

Functional Annotation