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  5. SOLTUB.AGRIA.G00000023846

SOLTUB.AGRIA.G00000023846


Description : nuclease


Gene families : OG_02_0015610 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023846
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_248


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000785 chromatin IEP Predict GO terms from Neighborhoods
CC GO:0000791 euchromatin IEP Predict GO terms from Neighborhoods
CC GO:0000793 condensed chromosome IEP Predict GO terms from Neighborhoods
BP GO:0002052 positive regulation of neuroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0003128 heart field specification IEP Predict GO terms from Neighborhoods
BP GO:0003139 secondary heart field specification IEP Predict GO terms from Neighborhoods
BP GO:0003207 cardiac chamber formation IEP Predict GO terms from Neighborhoods
BP GO:0003211 cardiac ventricle formation IEP Predict GO terms from Neighborhoods
BP GO:0003219 cardiac right ventricle formation IEP Predict GO terms from Neighborhoods
BP GO:0003407 neural retina development IEP Predict GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003697 single-stranded DNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Predict GO terms from Neighborhoods
MF GO:0003713 transcription coactivator activity IEP Predict GO terms from Neighborhoods
MF GO:0005102 signaling receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0005509 calcium ion binding IEP Predict GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Predict GO terms from Neighborhoods
CC GO:0005635 nuclear envelope IEP Predict GO terms from Neighborhoods
CC GO:0005652 nuclear lamina IEP Predict GO terms from Neighborhoods
CC GO:0005654 nucleoplasm IEP Predict GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Predict GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0006337 nucleosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Predict GO terms from Neighborhoods
BP GO:0006355 regulation of DNA-templated transcription IEP Predict GO terms from Neighborhoods
BP GO:0006606 protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006607 NLS-bearing protein import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Predict GO terms from Neighborhoods
BP GO:0006997 nucleus organization IEP Predict GO terms from Neighborhoods
BP GO:0006999 nuclear pore organization IEP Predict GO terms from Neighborhoods
BP GO:0007406 negative regulation of neuroblast proliferation IEP Predict GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Predict GO terms from Neighborhoods
BP GO:0008284 positive regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0010092 specification of animal organ identity IEP Predict GO terms from Neighborhoods
BP GO:0010224 response to UV-B IEP Predict GO terms from Neighborhoods
BP GO:0010498 proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0010638 positive regulation of organelle organization IEP Predict GO terms from Neighborhoods
BP GO:0010720 positive regulation of cell development IEP Predict GO terms from Neighborhoods
BP GO:0010721 negative regulation of cell development IEP Predict GO terms from Neighborhoods
CC GO:0016514 SWI/SNF complex IEP Predict GO terms from Neighborhoods
MF GO:0016922 nuclear receptor binding IEP Predict GO terms from Neighborhoods
MF GO:0017022 myosin binding IEP Predict GO terms from Neighborhoods
MF GO:0017056 structural constituent of nuclear pore IEP Predict GO terms from Neighborhoods
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Predict GO terms from Neighborhoods
MF GO:0030374 nuclear receptor coactivator activity IEP Predict GO terms from Neighborhoods
BP GO:0031445 regulation of heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031453 positive regulation of heterochromatin formation IEP Predict GO terms from Neighborhoods
CC GO:0031965 nuclear membrane IEP Predict GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
BP GO:0033044 regulation of chromosome organization IEP Predict GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Predict GO terms from Neighborhoods
BP GO:0034097 response to cytokine IEP Predict GO terms from Neighborhoods
BP GO:0034504 protein localization to nucleus IEP Predict GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Predict GO terms from Neighborhoods
BP GO:0034976 response to endoplasmic reticulum stress IEP Predict GO terms from Neighborhoods
CC GO:0035060 brahma complex IEP Predict GO terms from Neighborhoods
BP GO:0036503 ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0042692 muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0043393 regulation of protein binding IEP Predict GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Predict GO terms from Neighborhoods
BP GO:0044089 positive regulation of cellular component biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0044613 nuclear pore central transport channel IEP Predict GO terms from Neighborhoods
CC GO:0044615 nuclear pore nuclear basket IEP Predict GO terms from Neighborhoods
BP GO:0045596 negative regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0045597 positive regulation of cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0050767 regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050768 negative regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050769 positive regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0051098 regulation of binding IEP Predict GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Predict GO terms from Neighborhoods
BP GO:0051170 import into nucleus IEP Predict GO terms from Neighborhoods
BP GO:0051252 regulation of RNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051960 regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0051961 negative regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0051962 positive regulation of nervous system development IEP Predict GO terms from Neighborhoods
BP GO:0055074 calcium ion homeostasis IEP Predict GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0060284 regulation of cell development IEP Predict GO terms from Neighborhoods
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Predict GO terms from Neighborhoods
BP GO:0071345 cellular response to cytokine stimulus IEP Predict GO terms from Neighborhoods
CC GO:0071564 npBAF complex IEP Predict GO terms from Neighborhoods
CC GO:0071565 nBAF complex IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
BP GO:0072507 divalent inorganic cation homeostasis IEP Predict GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Predict GO terms from Neighborhoods
BP GO:0120261 regulation of heterochromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0120263 positive regulation of heterochromatin organization IEP Predict GO terms from Neighborhoods
MF GO:0140297 DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1902275 regulation of chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:1902692 regulation of neuroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predict GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:1905269 positive regulation of chromatin organization IEP Predict GO terms from Neighborhoods
BP GO:1990823 response to leukemia inhibitory factor IEP Predict GO terms from Neighborhoods
BP GO:1990830 cellular response to leukemia inhibitory factor IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000177 regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000178 negative regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000179 positive regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2001141 regulation of RNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2001252 positive regulation of chromosome organization IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 257 399
No external refs found!