Description : AT hook motif-containing protein, putative
Gene families : OG_02_0004767 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000026215 | |
| Cluster | HCCA Clusters (HRR 50 & PCC 0.5): Cluster_22 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000109 | nucleotide-excision repair complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000151 | ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000153 | cytoplasmic ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000217 | DNA secondary structure binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000428 | DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000715 | nucleotide-excision repair, DNA damage recognition | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000785 | chromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000791 | euchromatin | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000793 | condensed chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000794 | condensed nuclear chromosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000911 | cytokinesis by cell plate formation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000993 | RNA polymerase II complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001098 | basal transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001539 | cilium or flagellum-dependent cell motility | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0002052 | positive regulation of neuroblast proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003128 | heart field specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003139 | secondary heart field specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003207 | cardiac chamber formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003211 | cardiac ventricle formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003219 | cardiac right ventricle formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003341 | cilium movement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003407 | neural retina development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003680 | minor groove of adenine-thymine-rich DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003684 | damaged DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003712 | transcription coregulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003713 | transcription coactivator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005667 | transcription regulator complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005694 | chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005700 | polytene chromosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005784 | Sec61 translocon complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005819 | spindle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005826 | actomyosin contractile ring | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006277 | DNA amplification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006337 | nucleosome disassembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006508 | proteolysis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006521 | regulation of cellular amino acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006616 | SRP-dependent cotranslational protein targeting to membrane, translocation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006996 | organelle organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007017 | microtubule-based process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007307 | eggshell chorion gene amplification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007389 | pattern specification process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007406 | negative regulation of neuroblast proliferation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0008284 | positive regulation of cell population proliferation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008320 | protein transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009704 | de-etiolation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009864 | induced systemic resistance, jasmonic acid mediated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009934 | regulation of meristem structural organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010092 | specification of animal organ identity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010105 | negative regulation of ethylene-activated signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010235 | guard mother cell cytokinesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010375 | stomatal complex patterning | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010468 | regulation of gene expression | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010721 | negative regulation of cell development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015450 | protein-transporting ATPase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016363 | nuclear matrix | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016514 | SWI/SNF complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016591 | RNA polymerase II, holoenzyme | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016592 | mediator complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016604 | nuclear body | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016922 | nuclear receptor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017022 | myosin binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0017053 | transcription repressor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019827 | stem cell population maintenance | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019838 | growth factor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0019904 | protein domain specific binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0022884 | macromolecule transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030163 | protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030317 | flagellated sperm motility | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030374 | nuclear receptor coactivator activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030849 | autosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030880 | RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0030970 | retrograde protein transport, ER to cytosol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031204 | post-translational protein targeting to membrane, translocation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031205 | endoplasmic reticulum Sec complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031445 | regulation of heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031453 | positive regulation of heterochromatin formation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031467 | Cul7-RING ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031523 | Myb complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0031593 | polyubiquitin modification-dependent protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032527 | protein exit from endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032986 | protein-DNA complex disassembly | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033032 | regulation of myeloid cell apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033033 | negative regulation of myeloid cell apoptotic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033238 | regulation of cellular amine metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0034657 | GID complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0035060 | brahma complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036302 | atrioventricular canal development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0042562 | hormone binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042692 | muscle cell differentiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043022 | ribosome binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043175 | RNA polymerase core enzyme binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043223 | cytoplasmic SCF ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044322 | endoplasmic reticulum quality control compartment | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045048 | protein insertion into ER membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045910 | negative regulation of DNA recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045944 | positive regulation of transcription by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048408 | epidermal growth factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048444 | floral organ morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048568 | embryonic organ development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048821 | erythrocyte development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048822 | enucleate erythrocyte development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050768 | negative regulation of neurogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050794 | regulation of cellular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051205 | protein insertion into membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051726 | regulation of cell cycle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051961 | negative regulation of nervous system development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055029 | nuclear DNA-directed RNA polymerase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060285 | cilium-dependent cell motility | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0060294 | cilium movement involved in cell motility | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061515 | myeloid cell development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0062211 | root regeneration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070063 | RNA polymerase binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070176 | DRM complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070298 | negative regulation of phosphorelay signal transduction system | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070628 | proteasome binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070847 | core mediator complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070938 | contractile ring | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070940 | dephosphorylation of RNA polymerase II C-terminal domain | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071256 | translocon complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071564 | npBAF complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071565 | nBAF complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071816 | tail-anchored membrane protein insertion into ER membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0071942 | XPC complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0071987 | WD40-repeat domain binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090332 | stomatal closure | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090357 | regulation of tryptophan metabolic process | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090571 | RNA polymerase II transcription repressor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090708 | specification of plant organ axis polarity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097602 | cullin family protein binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097722 | sperm motility | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098727 | maintenance of cell number | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098760 | response to interleukin-7 | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0098761 | cellular response to interleukin-7 | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120261 | regulation of heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0120263 | positive regulation of heterochromatin organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140110 | transcription regulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140318 | protein transporter activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902275 | regulation of chromatin organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902692 | regulation of neuroblast proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903513 | endoplasmic reticulum to cytosol transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905072 | cardiac jelly development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905269 | positive regulation of chromatin organization | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990234 | transferase complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990444 | F-box domain binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000024 | regulation of leaf development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000177 | regulation of neural precursor cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000178 | negative regulation of neural precursor cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000179 | positive regulation of neural precursor cell proliferation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001252 | positive regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |
No InterPro domains available for this sequence
| No external refs found! |