SOLTUB.AGRIA.G00000034333

Description : paired amphipathic helix Sin3-like protein

Gene families : OG_02_0003570 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000034333
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_30

Type	GO Term	Name	Evidence	Source
CC	GO:0000118	histone deacetylase complex	None	Extended
BP	GO:0000122	negative regulation of transcription by RNA polymerase II	IEA	AHRD
CC	GO:0000776	kinetochore	IEA	AHRD
BP	GO:0001558	regulation of cell growth	None	Extended
BP	GO:0001678	cellular glucose homeostasis	None	Extended
BP	GO:0001701	in utero embryonic development	IEA	AHRD
BP	GO:0002218	activation of innate immune response	IEA	AHRD
BP	GO:0002230	positive regulation of defense response to virus by host	IEA	AHRD
BP	GO:0002244	hematopoietic progenitor cell differentiation	IEA	AHRD
BP	GO:0002253	activation of immune response	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002684	positive regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
BP	GO:0002833	positive regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	AHRD
MF	GO:0003682	chromatin binding	IEA	AHRD
MF	GO:0003712	transcription coregulator activity	None	Extended
MF	GO:0003713	transcription coactivator activity	IEA	AHRD
MF	GO:0003714	transcription corepressor activity	IEA	AHRD
MF	GO:0003723	RNA binding	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005667	transcription regulator complex	None	Extended
CC	GO:0005829	cytosol	IEA	AHRD
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	AHRD
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006357	regulation of transcription by RNA polymerase II	None	Extended
BP	GO:0006476	protein deacetylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007346	regulation of mitotic cell cycle	None	Extended
BP	GO:0007568	aging	IEA	AHRD
MF	GO:0008134	transcription factor binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009737	response to abscisic acid	IEA	AHRD
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009746	response to hexose	None	Extended
BP	GO:0009749	response to glucose	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009792	embryo development ending in birth or egg hatching	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009890	negative regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010243	response to organonitrogen compound	IEA	AHRD
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0010817	regulation of hormone levels	IEA	AHRD
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0010971	positive regulation of G2/M transition of mitotic cell cycle	IEA	AHRD
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016575	histone deacetylation	IEA	AHRD
CC	GO:0016580	Sin3 complex	IEA	AHRD
CC	GO:0017053	transcription repressor complex	IEA	AHRD
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
BP	GO:0021895	cerebral cortex neuron differentiation	IEA	AHRD
BP	GO:0021953	central nervous system neuron differentiation	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030182	neuron differentiation	None	Extended
BP	GO:0030516	regulation of axon extension	IEA	AHRD
BP	GO:0031056	regulation of histone modification	None	Extended
BP	GO:0031057	negative regulation of histone modification	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031327	negative regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0031349	positive regulation of defense response	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031400	negative regulation of protein modification process	None	Extended
BP	GO:0031937	obsolete positive regulation of chromatin silencing	IEA	AHRD
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0032103	positive regulation of response to external stimulus	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033500	carbohydrate homeostasis	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0034284	response to monosaccharide	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035065	regulation of histone acetylation	None	Extended
BP	GO:0035067	negative regulation of histone acetylation	None	Extended
BP	GO:0035601	protein deacylation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042592	homeostatic process	None	Extended
BP	GO:0042593	glucose homeostasis	None	Extended
BP	GO:0042752	regulation of circadian rhythm	None	Extended
BP	GO:0042754	negative regulation of circadian rhythm	IEA	AHRD
BP	GO:0042981	regulation of apoptotic process	None	Extended
BP	GO:0043009	chordate embryonic development	None	Extended
BP	GO:0043066	negative regulation of apoptotic process	IEA	AHRD
BP	GO:0043067	regulation of programmed cell death	None	Extended
BP	GO:0043069	negative regulation of programmed cell death	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043392	negative regulation of DNA binding	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043618	regulation of transcription from RNA polymerase II promoter in response to stress	None	Extended
BP	GO:0043619	regulation of transcription from RNA polymerase II promoter in response to oxidative stress	IEA	AHRD
BP	GO:0043620	regulation of DNA-templated transcription in response to stress	None	Extended
BP	GO:0044092	negative regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0044877	protein-containing complex binding	IEA	AHRD
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045089	positive regulation of innate immune response	None	Extended
BP	GO:0045595	regulation of cell differentiation	None	Extended
BP	GO:0045597	positive regulation of cell differentiation	None	Extended
BP	GO:0045664	regulation of neuron differentiation	None	Extended
BP	GO:0045666	positive regulation of neuron differentiation	IEA	AHRD
BP	GO:0045787	positive regulation of cell cycle	None	Extended
BP	GO:0045892	negative regulation of DNA-templated transcription	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	None	Extended
BP	GO:0045931	positive regulation of mitotic cell cycle	None	Extended
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0045944	positive regulation of transcription by RNA polymerase II	IEA	AHRD
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048584	positive regulation of response to stimulus	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050688	regulation of defense response to virus	None	Extended
BP	GO:0050691	regulation of defense response to virus by host	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050778	positive regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051098	regulation of binding	None	Extended
BP	GO:0051100	negative regulation of binding	None	Extended
BP	GO:0051101	regulation of DNA binding	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051248	negative regulation of protein metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051253	negative regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0051595	response to methylglyoxal	IEA	AHRD
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0060548	negative regulation of cell death	None	Extended
BP	GO:0061387	regulation of extent of cell growth	None	Extended
MF	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	IEA	AHRD
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
CC	GO:0070822	Sin3-type complex	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071310	cellular response to organic substance	None	Extended
BP	GO:0071322	cellular response to carbohydrate stimulus	None	Extended
BP	GO:0071326	cellular response to monosaccharide stimulus	None	Extended
BP	GO:0071331	cellular response to hexose stimulus	None	Extended
BP	GO:0071333	cellular response to glucose stimulus	IEA	AHRD
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0090068	positive regulation of cell cycle process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
BP	GO:0098732	macromolecule deacylation	None	Extended
MF	GO:0098772	molecular function regulator activity	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:0140297	DNA-binding transcription factor binding	None	Extended
MF	GO:0140416	transcription regulator inhibitor activity	IEA	AHRD
CC	GO:0140513	nuclear protein-containing complex	None	Extended
MF	GO:0140678	molecular function inhibitor activity	None	Extended
BP	GO:1900180	regulation of protein localization to nucleus	None	Extended
BP	GO:1900181	negative regulation of protein localization to nucleus	IEA	AHRD
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901654	response to ketone	None	Extended
BP	GO:1901674	regulation of histone H3-K27 acetylation	None	Extended
BP	GO:1901675	negative regulation of histone H3-K27 acetylation	IEA	AHRD
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1901983	regulation of protein acetylation	None	Extended
BP	GO:1901984	negative regulation of protein acetylation	None	Extended
BP	GO:1901987	regulation of cell cycle phase transition	None	Extended
BP	GO:1901989	positive regulation of cell cycle phase transition	None	Extended
BP	GO:1901990	regulation of mitotic cell cycle phase transition	None	Extended
BP	GO:1901992	positive regulation of mitotic cell cycle phase transition	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
BP	GO:1902679	negative regulation of RNA biosynthetic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1902749	regulation of cell cycle G2/M phase transition	None	Extended
BP	GO:1902751	positive regulation of cell cycle G2/M phase transition	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903828	negative regulation of protein localization	None	Extended
BP	GO:2000677	regulation of transcription regulatory region DNA binding	None	Extended
BP	GO:2000678	negative regulation of transcription regulatory region DNA binding	IEA	AHRD
BP	GO:2000756	regulation of peptidyl-lysine acetylation	None	Extended
BP	GO:2000757	negative regulation of peptidyl-lysine acetylation	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000012	single strand break repair	IEP	Predict GO terms from Neighborhoods
BP	GO:0000272	polysaccharide catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0003725	double-stranded RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0004518	nuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004529	exodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predict GO terms from Neighborhoods
MF	GO:0004650	polygalacturonase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005154	epidermal growth factor receptor binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0005618	cell wall	IEP	Predict GO terms from Neighborhoods
CC	GO:0005797	Golgi medial cisterna	IEP	Predict GO terms from Neighborhoods
BP	GO:0006074	(1->3)-beta-D-glucan metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006076	(1->3)-beta-D-glucan catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006505	GPI anchor metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006507	GPI anchor release	IEP	Predict GO terms from Neighborhoods
BP	GO:0007411	axon guidance	IEP	Predict GO terms from Neighborhoods
BP	GO:0008045	motor neuron axon guidance	IEP	Predict GO terms from Neighborhoods
MF	GO:0008409	5'-3' exonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0009830	cell wall modification involved in abscission	IEP	Predict GO terms from Neighborhoods
BP	GO:0009952	anterior/posterior pattern specification	IEP	Predict GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0016752	sinapoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016753	O-sinapoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016754	sinapoylglucose-malate O-sinapoyltransferase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predict GO terms from Neighborhoods
MF	GO:0016819	hydrolase activity, acting on acid anhydrides, in sulfonyl-containing anhydrides	IEP	Predict GO terms from Neighborhoods
MF	GO:0016895	exodeoxyribonuclease activity, producing 5'-phosphomonoesters	IEP	Predict GO terms from Neighborhoods
BP	GO:0019221	cytokine-mediated signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0021532	neural tube patterning	IEP	Predict GO terms from Neighborhoods
CC	GO:0030014	CCR4-NOT complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030015	CCR4-NOT core complex	IEP	Predict GO terms from Neighborhoods
CC	GO:0030312	external encapsulating structure	IEP	Predict GO terms from Neighborhoods
MF	GO:0030374	nuclear receptor coactivator activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0030983	mismatched DNA binding	IEP	Predict GO terms from Neighborhoods
CC	GO:0031012	extracellular matrix	IEP	Predict GO terms from Neighborhoods
CC	GO:0031225	anchored component of membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0032578	aleurone grain membrane	IEP	Predict GO terms from Neighborhoods
BP	GO:0033135	regulation of peptidyl-serine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033138	positive regulation of peptidyl-serine phosphorylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0033144	negative regulation of intracellular steroid hormone receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0033146	regulation of intracellular estrogen receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0033147	negative regulation of intracellular estrogen receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0033620	Mei2 nuclear dot complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0033699	DNA 5'-adenosine monophosphate hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0035312	5'-3' exodeoxyribonuclease activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0042058	regulation of epidermal growth factor receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0044277	cell wall disassembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0045229	external encapsulating structure organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0045742	positive regulation of epidermal growth factor receptor signaling pathway	IEP	Predict GO terms from Neighborhoods
CC	GO:0046658	anchored component of plasma membrane	IEP	Predict GO terms from Neighborhoods
MF	GO:0047627	adenylylsulfatase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0051275	beta-glucan catabolic process	IEP	Predict GO terms from Neighborhoods
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0052793	pectin acetylesterase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0070851	growth factor receptor binding	IEP	Predict GO terms from Neighborhoods
BP	GO:0071555	cell wall organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0090090	negative regulation of canonical Wnt signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0097485	neuron projection guidance	IEP	Predict GO terms from Neighborhoods
BP	GO:1901186	positive regulation of ERBB signaling pathway	IEP	Predict GO terms from Neighborhoods
MF	GO:1990165	single-strand break-containing DNA binding	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003822	PAH	8	36
IPR003822	PAH	77	116
IPR036600	PAH_sf	7	38
IPR036600	PAH_sf	56	118

External Links

No external refs found!

SOLTUB.AGRIA.G00000034333

Expression Profile

Co-expression Networks

Functional Annotation