| MF | GO:0000014 | single-stranded DNA endodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000109 | nucleotide-excision repair complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000149 | SNARE binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000325 | plant-type vacuole | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000331 | contractile vacuole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000722 | telomere maintenance via recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000723 | telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000725 | recombinational repair | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000781 | chromosome, telomeric region | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001501 | skeletal system development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0003008 | system process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003684 | damaged DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004520 | endodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004536 | deoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005483 | soluble NSF attachment protein activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0005484 | SNAP receptor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005767 | secondary lysosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005776 | autophagosome | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005801 | cis-Golgi network | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006282 | regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006284 | base-excision repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006302 | double-strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006304 | DNA modification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006312 | mitotic recombination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006623 | protein targeting to vacuole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006810 | transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006892 | post-Golgi vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006896 | Golgi to vacuole transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006906 | vesicle fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006914 | autophagy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007030 | Golgi organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007219 | Notch signaling pathway | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007283 | spermatogenesis | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0008021 | synaptic vesicle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009554 | megasporogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009934 | regulation of meristem structural organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009956 | radial pattern formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010305 | leaf vascular tissue pattern formation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0010385 | double-stranded methylated DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010835 | regulation of protein ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010836 | negative regulation of protein ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010922 | positive regulation of phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0012507 | ER to Golgi transport vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016021 | integral component of membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016032 | viral process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016236 | macroautophagy | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016482 | cytosolic transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016485 | protein processing | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0018995 | host cellular component | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021587 | cerebellum morphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0021766 | hippocampus development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030008 | TRAPP complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030133 | transport vesicle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030135 | coated vesicle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030136 | clathrin-coated vesicle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030139 | endocytic vesicle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030173 | integral component of Golgi membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030658 | transport vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0030662 | coated vesicle membrane | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030674 | protein-macromolecule adaptor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031201 | SNARE complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031228 | intrinsic component of Golgi membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031902 | late endosome membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0032010 | phagolysosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032200 | telomere organization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0032205 | negative regulation of telomere maintenance | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032356 | oxidized DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033194 | response to hydroperoxide | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0033227 | dsRNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034293 | sexual sporulation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035265 | organ growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035306 | positive regulation of dephosphorylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035510 | DNA dealkylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042144 | vacuole fusion, non-autophagic | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043657 | host cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0044306 | neuron projection terminus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044325 | transmembrane transporter binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044728 | DNA methylation or demethylation | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0045335 | phagocytic vesicle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045739 | positive regulation of DNA repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046794 | transport of virus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046907 | intracellular transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048193 | Golgi vesicle transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048236 | plant-type sporogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048284 | organelle fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050657 | nucleic acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050658 | RNA transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050829 | defense response to Gram-negative bacterium | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050877 | nervous system process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050879 | multicellular organismal movement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050881 | musculoskeletal movement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050882 | voluntary musculoskeletal movement | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0050905 | neuromuscular process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051053 | negative regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051054 | positive regulation of DNA metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051105 | regulation of DNA ligation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051106 | positive regulation of DNA ligation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051236 | establishment of RNA localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051340 | regulation of ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051345 | positive regulation of hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051351 | positive regulation of ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051604 | protein maturation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051649 | establishment of localization in cell | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0055037 | recycling endosome | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0060090 | molecular adaptor activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061025 | membrane fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061819 | telomeric DNA-containing double minutes formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070382 | exocytic vesicle | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070522 | ERCC4-ERCC1 complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0070765 | gamma-secretase complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070988 | demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072665 | protein localization to vacuole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072666 | establishment of protein localization to vacuole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0075733 | intracellular transport of virus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080111 | DNA demethylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090161 | Golgi ribbon formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090174 | organelle membrane fusion | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0097576 | vacuole fusion | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098797 | plasma membrane protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0098852 | lytic vacuole membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0099023 | vesicle tethering complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901968 | regulation of polynucleotide 3'-phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901969 | positive regulation of polynucleotide 3'-phosphatase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901971 | regulation of DNA-5-methylcytosine glycosylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901972 | positive regulation of DNA-5-methylcytosine glycosylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902544 | regulation of DNA N-glycosylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902546 | positive regulation of DNA N-glycosylase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903516 | regulation of single strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1903518 | positive regulation of single strand break repair | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904353 | regulation of telomere capping | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904354 | negative regulation of telomere capping | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904505 | regulation of telomere maintenance in response to DNA damage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904506 | negative regulation of telomere maintenance in response to DNA damage | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904875 | regulation of DNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904877 | positive regulation of DNA ligase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905764 | regulation of protection from non-homologous end joining at telomere | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1905765 | negative regulation of protection from non-homologous end joining at telomere | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990071 | TRAPPII protein complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:1990072 | TRAPPIII protein complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990414 | replication-born double-strand break repair via sister chromatid exchange | IEP | Predict GO terms from Neighborhoods |
| MF | GO:1990599 | 3' overhang single-stranded DNA endodeoxyribonuclease activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001021 | negative regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001022 | positive regulation of response to DNA damage stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2001251 | negative regulation of chromosome organization | IEP | Predict GO terms from Neighborhoods |