Coexpression cluster: Cluster_54 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0045898 regulation of RNA polymerase II transcription preinitiation complex assembly 3.61% (3/83) 5.88 1.8e-05 0.003926
GO:0008540 proteasome regulatory particle, base subcomplex 3.61% (3/83) 5.66 2.9e-05 0.003947
GO:0022623 proteasome-activating nucleotidase complex 2.41% (2/83) 7.88 2.7e-05 0.004131
GO:1905368 peptidase complex 4.82% (4/83) 4.45 3.5e-05 0.004237
GO:0031597 cytosolic proteasome complex 3.61% (3/83) 5.94 1.6e-05 0.004301
GO:0001824 blastocyst development 3.61% (3/83) 5.71 2.6e-05 0.004706
GO:0043273 CTPase activity 2.41% (2/83) 7.56 4.4e-05 0.004813
GO:0045899 positive regulation of RNA polymerase II transcription preinitiation complex assembly 3.61% (3/83) 6.0 1.4e-05 0.004994
GO:0070682 proteasome regulatory particle assembly 3.61% (3/83) 6.07 1.2e-05 0.006479
GO:0046509 1,2-diacylglycerol 3-beta-galactosyltransferase activity 2.41% (2/83) 7.29 6.6e-05 0.006555
GO:0043335 protein unfolding 2.41% (2/83) 7.07 9.3e-05 0.007754
GO:0043248 proteasome assembly 3.61% (3/83) 5.14 8.6e-05 0.007792
GO:0036402 proteasome-activating activity 3.61% (3/83) 6.29 7e-06 0.007987
GO:0016234 inclusion body 3.61% (3/83) 5.04 0.000107 0.008304
GO:0060261 positive regulation of transcription initiation by RNA polymerase II 3.61% (3/83) 5.0 0.000115 0.008305
GO:2000144 positive regulation of DNA-templated transcription initiation 3.61% (3/83) 4.94 0.000131 0.008897
GO:0017025 TBP-class protein binding 3.61% (3/83) 4.79 0.000179 0.010199
GO:0060260 regulation of transcription initiation by RNA polymerase II 3.61% (3/83) 4.79 0.000179 0.010199
GO:0000502 proteasome complex 3.61% (3/83) 4.82 0.000168 0.010745
GO:1905369 endopeptidase complex 3.61% (3/83) 4.68 0.000224 0.012132
GO:0001055 RNA polymerase II activity 2.41% (2/83) 6.42 0.000242 0.012502
GO:2000142 regulation of DNA-templated transcription initiation 3.61% (3/83) 4.58 0.000275 0.013584
GO:0001054 RNA polymerase I activity 2.41% (2/83) 6.29 0.00029 0.013679
GO:0010375 stomatal complex patterning 2.41% (2/83) 5.97 0.000459 0.020769
GO:1903050 regulation of proteolysis involved in protein catabolic process 6.02% (5/83) 2.92 0.00054 0.023432
GO:0140296 general transcription initiation factor binding 3.61% (3/83) 4.14 0.000674 0.027089
GO:0001056 RNA polymerase III activity 2.41% (2/83) 5.71 0.000667 0.027821
GO:0005736 RNA polymerase I complex 2.41% (2/83) 5.63 0.000744 0.028833
GO:0042797 tRNA transcription by RNA polymerase III 2.41% (2/83) 5.56 0.000826 0.030889
GO:0009304 tRNA transcription 2.41% (2/83) 5.49 0.000911 0.032957
GO:0005666 RNA polymerase III complex 2.41% (2/83) 5.29 0.001193 0.041745
GO:0000418 RNA polymerase IV complex 2.41% (2/83) 5.24 0.001295 0.042566
GO:0003968 RNA-directed 5'-3' RNA polymerase activity 2.41% (2/83) 5.24 0.001295 0.042566
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_66 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_69 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_102 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_107 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_114 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_143 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_145 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_166 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_170 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_175 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_198 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_204 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_213 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_214 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_222 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_224 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_250 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_266 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_268 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_288 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_391 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_3 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_13 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_17 0.018 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_26 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_28 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_38 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_40 0.008 Orthogroups with 8 Potato genotypes Compare
Sequences (83) (download table)

InterPro Domains

GO Terms

Family Terms