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  5. SOLTUB.AGRIA.G00000012428

SOLTUB.AGRIA.G00000012428


Description : Succinate dehydrogenase assembly factor 2, mitochondrial


Gene families : OG_02_0013899 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000012428
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_255


Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEA AHRD
BP GO:0006099 tricarboxylic acid cycle IEA AHRD
BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEA AHRD
BP GO:0018293 protein-FAD linkage IEA AHRD
BP GO:0034553 mitochondrial respiratory chain complex II assembly IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000153 cytoplasmic ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Predict GO terms from Neighborhoods
CC GO:0000835 ER ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000836 Hrd1p ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000837 Doa10p ubiquitin ligase complex IEP Predict GO terms from Neighborhoods
CC GO:0000839 Hrd1p ubiquitin ligase ERAD-L complex IEP Predict GO terms from Neighborhoods
BP GO:0001501 skeletal system development IEP Predict GO terms from Neighborhoods
CC GO:0001669 acrosomal vesicle IEP Predict GO terms from Neighborhoods
BP GO:0001763 morphogenesis of a branching structure IEP Predict GO terms from Neighborhoods
BP GO:0001817 regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0001818 negative regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0002009 morphogenesis of an epithelium IEP Predict GO terms from Neighborhoods
MF GO:0003730 mRNA 3'-UTR binding IEP Predict GO terms from Neighborhoods
MF GO:0003951 NAD+ kinase activity IEP Predict GO terms from Neighborhoods
MF GO:0003960 NADPH:quinone reductase activity IEP Predict GO terms from Neighborhoods
MF GO:0004197 cysteine-type endopeptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
MF GO:0005212 structural constituent of eye lens IEP Predict GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Predict GO terms from Neighborhoods
CC GO:0005778 peroxisomal membrane IEP Predict GO terms from Neighborhoods
CC GO:0005782 peroxisomal matrix IEP Predict GO terms from Neighborhoods
CC GO:0005902 microvillus IEP Predict GO terms from Neighborhoods
BP GO:0006274 DNA replication termination IEP Predict GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Predict GO terms from Neighborhoods
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Predict GO terms from Neighborhoods
BP GO:0006635 fatty acid beta-oxidation IEP Predict GO terms from Neighborhoods
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006739 NADP metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006741 NADP biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Predict GO terms from Neighborhoods
BP GO:0007030 Golgi organization IEP Predict GO terms from Neighborhoods
BP GO:0007430 terminal branching, open tracheal system IEP Predict GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008234 cysteine-type peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0008553 P-type proton-exporting transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0008589 regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
MF GO:0008670 2,4-dienoyl-CoA reductase (NADPH) activity IEP Predict GO terms from Neighborhoods
BP GO:0009062 fatty acid catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0009266 response to temperature stimulus IEP Predict GO terms from Neighborhoods
CC GO:0009509 chromoplast IEP Predict GO terms from Neighborhoods
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0009968 negative regulation of signal transduction IEP Predict GO terms from Neighborhoods
BP GO:0010017 red or far-red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010099 regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010100 negative regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0010109 regulation of photosynthesis IEP Predict GO terms from Neighborhoods
BP GO:0010161 red light signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0010205 photoinhibition IEP Predict GO terms from Neighborhoods
CC GO:0010287 plastoglobule IEP Predict GO terms from Neighborhoods
CC GO:0010319 stromule IEP Predict GO terms from Neighborhoods
CC GO:0010494 cytoplasmic stress granule IEP Predict GO terms from Neighborhoods
BP GO:0010623 programmed cell death involved in cell development IEP Predict GO terms from Neighborhoods
BP GO:0010648 negative regulation of cell communication IEP Predict GO terms from Neighborhoods
BP GO:0010842 retina layer formation IEP Predict GO terms from Neighborhoods
MF GO:0015662 P-type ion transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0016075 rRNA catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0016229 steroid dehydrogenase activity IEP Predict GO terms from Neighborhoods
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predict GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Predict GO terms from Neighborhoods
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predict GO terms from Neighborhoods
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predict GO terms from Neighborhoods
MF GO:0019166 trans-2-enoyl-CoA reductase (NADPH) activity IEP Predict GO terms from Neighborhoods
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019362 pyridine nucleotide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0019395 fatty acid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0019674 NAD metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Predict GO terms from Neighborhoods
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0022413 reproductive process in single-celled organism IEP Predict GO terms from Neighborhoods
CC GO:0022626 cytosolic ribosome IEP Predict GO terms from Neighborhoods
BP GO:0023057 negative regulation of signaling IEP Predict GO terms from Neighborhoods
CC GO:0030141 secretory granule IEP Predict GO terms from Neighborhoods
BP GO:0030258 lipid modification IEP Predict GO terms from Neighborhoods
BP GO:0030433 ubiquitin-dependent ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0030435 sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0030437 ascospore formation IEP Predict GO terms from Neighborhoods
CC GO:0030894 replisome IEP Predict GO terms from Neighborhoods
BP GO:0030970 retrograde protein transport, ER to cytosol IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
CC GO:0031164 contractile vacuolar membrane IEP Predict GO terms from Neighborhoods
MF GO:0031593 polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0031903 microbody membrane IEP Predict GO terms from Neighborhoods
CC GO:0031907 microbody lumen IEP Predict GO terms from Neighborhoods
BP GO:0031936 obsolete negative regulation of chromatin silencing IEP Predict GO terms from Neighborhoods
CC GO:0031977 thylakoid lumen IEP Predict GO terms from Neighborhoods
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032479 regulation of type I interferon production IEP Predict GO terms from Neighborhoods
BP GO:0032480 negative regulation of type I interferon production IEP Predict GO terms from Neighborhoods
BP GO:0032527 protein exit from endoplasmic reticulum IEP Predict GO terms from Neighborhoods
CC GO:0032993 protein-DNA complex IEP Predict GO terms from Neighborhoods
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predict GO terms from Neighborhoods
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Predict GO terms from Neighborhoods
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Predict GO terms from Neighborhoods
CC GO:0033181 plasma membrane proton-transporting V-type ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:0033559 unsaturated fatty acid metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predict GO terms from Neighborhoods
CC GO:0034098 VCP-NPL4-UFD1 AAA ATPase complex IEP Predict GO terms from Neighborhoods
BP GO:0034440 lipid oxidation IEP Predict GO terms from Neighborhoods
BP GO:0034661 ncRNA catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0035239 tube morphogenesis IEP Predict GO terms from Neighborhoods
MF GO:0036435 K48-linked polyubiquitin modification-dependent protein binding IEP Predict GO terms from Neighborhoods
CC GO:0036501 UFD1-NPL4 complex IEP Predict GO terms from Neighborhoods
BP GO:0036503 ERAD pathway IEP Predict GO terms from Neighborhoods
BP GO:0039531 regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039532 negative regulation of viral-induced cytoplasmic pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039535 regulation of RIG-I signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0039536 negative regulation of RIG-I signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042181 ketone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0042182 ketone catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042461 photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0042462 eye photoreceptor cell development IEP Predict GO terms from Neighborhoods
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predict GO terms from Neighborhoods
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0042736 NADH kinase activity IEP Predict GO terms from Neighborhoods
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP Predict GO terms from Neighborhoods
BP GO:0043935 sexual sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0044248 cellular catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044282 small molecule catabolic process IEP Predict GO terms from Neighborhoods
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Predict GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Predict GO terms from Neighborhoods
BP GO:0045176 apical protein localization IEP Predict GO terms from Neighborhoods
BP GO:0045879 negative regulation of smoothened signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048666 neuron development IEP Predict GO terms from Neighborhoods
BP GO:0048754 branching morphogenesis of an epithelial tube IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0048869 cellular developmental process IEP Predict GO terms from Neighborhoods
MF GO:0050661 NADP binding IEP Predict GO terms from Neighborhoods
BP GO:0050687 negative regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0050688 regulation of defense response to virus IEP Predict GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Predict GO terms from Neighborhoods
BP GO:0051053 negative regulation of DNA metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0051117 ATPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051241 negative regulation of multicellular organismal process IEP Predict GO terms from Neighborhoods
BP GO:0051348 negative regulation of transferase activity IEP Predict GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051972 regulation of telomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0051974 negative regulation of telomerase activity IEP Predict GO terms from Neighborhoods
BP GO:0060446 branching involved in open tracheal system development IEP Predict GO terms from Neighborhoods
BP GO:0061138 morphogenesis of a branching epithelium IEP Predict GO terms from Neighborhoods
BP GO:0062207 regulation of pattern recognition receptor signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:0070370 cellular heat acclimation IEP Predict GO terms from Neighborhoods
BP GO:0070651 nonfunctional rRNA decay IEP Predict GO terms from Neighborhoods
BP GO:0071214 cellular response to abiotic stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071478 cellular response to radiation IEP Predict GO terms from Neighborhoods
BP GO:0071482 cellular response to light stimulus IEP Predict GO terms from Neighborhoods
BP GO:0071483 cellular response to blue light IEP Predict GO terms from Neighborhoods
BP GO:0071489 cellular response to red or far red light IEP Predict GO terms from Neighborhoods
BP GO:0071491 cellular response to red light IEP Predict GO terms from Neighborhoods
BP GO:0071629 cytoplasm protein quality control by the ubiquitin-proteasome system IEP Predict GO terms from Neighborhoods
BP GO:0071712 ER-associated misfolded protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072524 pyridine-containing compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0072665 protein localization to vacuole IEP Predict GO terms from Neighborhoods
BP GO:0072671 mitochondria-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090351 seedling development IEP Predict GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Predict GO terms from Neighborhoods
CC GO:0098858 actin-based cell projection IEP Predict GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Predict GO terms from Neighborhoods
BP GO:0104004 cellular response to environmental stimulus IEP Predict GO terms from Neighborhoods
MF GO:0140030 modification-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140358 P-type transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0140455 cytoplasm protein quality control IEP Predict GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1900457 regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1900458 negative regulation of brassinosteroid mediated signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901662 quinone catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1902446 regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902448 positive regulation of shade avoidance IEP Predict GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:1903513 endoplasmic reticulum to cytosol transport IEP Predict GO terms from Neighborhoods
BP GO:1905156 negative regulation of photosynthesis IEP Predict GO terms from Neighborhoods
CC GO:1990112 RQC complex IEP Predict GO terms from Neighborhoods
BP GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2000278 regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000279 negative regulation of DNA biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:2000306 positive regulation of photomorphogenesis IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR005631 SDH 70 139
IPR036714 SDH_sf 70 135
No external refs found!