SOLTUB.AGRIA.G00000023780

Description : Adenosylmethionine-8-amino-7-oxononanoate aminotransferase

Gene families : OG_02_0022900 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000023780
Cluster	HCCA Clusters (HRR 50 & PCC 0.5): Cluster_176

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	AHRD
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004015	adenosylmethionine-8-amino-7-oxononanoate transaminase activity	IEA	AHRD
MF	GO:0004141	dethiobiotin synthase activity	IEA	AHRD
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005759	mitochondrial matrix	IEA	AHRD
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006768	biotin metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008483	transaminase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009102	biotin biosynthetic process	IEA	AHRD
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016769	transferase activity, transferring nitrogenous groups	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	None	Extended
MF	GO:0016882	cyclo-ligase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0031974	membrane-enclosed lumen	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IEA	AHRD
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	IEA	AHRD
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043233	organelle lumen	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046872	metal ion binding	IEA	AHRD
MF	GO:0046983	protein dimerization activity	None	Extended
CC	GO:0070013	intracellular organelle lumen	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000118	histone deacetylase complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0000373	Group II intron splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation	IEP	Predict GO terms from Neighborhoods
CC	GO:0000785	chromatin	IEP	Predict GO terms from Neighborhoods
BP	GO:0000959	mitochondrial RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0000963	mitochondrial RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0000966	RNA 5'-end processing	IEP	Predict GO terms from Neighborhoods
CC	GO:0001650	fibrillar center	IEP	Predict GO terms from Neighborhoods
BP	GO:0002244	hematopoietic progenitor cell differentiation	IEP	Predict GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Predict GO terms from Neighborhoods
MF	GO:0003916	DNA topoisomerase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004016	adenylate cyclase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004559	alpha-mannosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0004638	phosphoribosylaminoimidazole carboxylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0005739	mitochondrion	IEP	Predict GO terms from Neighborhoods
CC	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	IEP	Predict GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006144	purine nucleobase metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006188	IMP biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006189	'de novo' IMP biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006265	DNA topological change	IEP	Predict GO terms from Neighborhoods
BP	GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006482	protein demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006491	N-glycan processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0006517	protein deglycosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0006842	tricarboxylic acid transport	IEP	Predict GO terms from Neighborhoods
BP	GO:0006879	cellular iron ion homeostasis	IEP	Predict GO terms from Neighborhoods
BP	GO:0007525	somatic muscle development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007526	larval somatic muscle development	IEP	Predict GO terms from Neighborhoods
BP	GO:0007585	respiratory gaseous exchange by respiratory system	IEP	Predict GO terms from Neighborhoods
BP	GO:0007622	rhythmic behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0008214	protein dealkylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0008380	RNA splicing	IEP	Predict GO terms from Neighborhoods
BP	GO:0008589	regulation of smoothened signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0009112	nucleobase metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009113	purine nucleobase biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0009330	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex	IEP	Predict GO terms from Neighborhoods
BP	GO:0009451	RNA modification	IEP	Predict GO terms from Neighborhoods
CC	GO:0009536	plastid	IEP	Predict GO terms from Neighborhoods
MF	GO:0009975	cyclase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0010044	response to aluminum ion	IEP	Predict GO terms from Neighborhoods
BP	GO:0010239	chloroplast mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0010257	NADH dehydrogenase complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0010467	gene expression	IEP	Predict GO terms from Neighborhoods
MF	GO:0015137	citrate transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015142	tricarboxylic acid transmembrane transporter activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0015746	citrate transport	IEP	Predict GO terms from Neighborhoods
MF	GO:0015923	mannosidase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0015924	mannosyl-oligosaccharide mannosidase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0016556	mRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0016577	histone demethylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0016592	mediator complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0016829	lyase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0016849	phosphorus-oxygen lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0030717	oocyte karyosome formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0030718	germ-line stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0031425	chloroplast RNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0032020	ISG15-protein conjugation	IEP	Predict GO terms from Neighborhoods
MF	GO:0032451	demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032452	histone demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0032453	histone H3-methyl-lysine-4 demethylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0032981	mitochondrial respiratory chain complex I assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033108	mitochondrial respiratory chain complex assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0033169	histone H3-K9 demethylation	IEP	Predict GO terms from Neighborhoods
MF	GO:0033749	histone H3-methyl-arginine-3 demethylase activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034335	DNA negative supercoiling activity	IEP	Predict GO terms from Neighborhoods
MF	GO:0034647	histone H3-tri/di/monomethyl-lysine-4 demethylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0034720	histone H3-K4 demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0034721	histone H3-K4 demethylation, trimethyl-H3-K4-specific	IEP	Predict GO terms from Neighborhoods
BP	GO:0035010	encapsulation of foreign target	IEP	Predict GO terms from Neighborhoods
BP	GO:0035067	negative regulation of histone acetylation	IEP	Predict GO terms from Neighborhoods
CC	GO:0035618	root hair	IEP	Predict GO terms from Neighborhoods
BP	GO:0035977	protein deglycosylation involved in glycoprotein catabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0036098	male germ-line stem cell population maintenance	IEP	Predict GO terms from Neighborhoods
BP	GO:0036507	protein demannosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0036508	protein alpha-1,2-demannosylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0036509	trimming of terminal mannose on B branch	IEP	Predict GO terms from Neighborhoods
BP	GO:0040009	regulation of growth rate	IEP	Predict GO terms from Neighborhoods
BP	GO:0040010	positive regulation of growth rate	IEP	Predict GO terms from Neighborhoods
MF	GO:0042296	ISG15 transferase activity	IEP	Predict GO terms from Neighborhoods
CC	GO:0042644	chloroplast nucleoid	IEP	Predict GO terms from Neighborhoods
CC	GO:0042646	plastid nucleoid	IEP	Predict GO terms from Neighborhoods
BP	GO:0043170	macromolecule metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0043412	macromolecule modification	IEP	Predict GO terms from Neighborhoods
MF	GO:0043727	5-amino-4-imidazole carboxylate lyase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0043966	histone H3 acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0043970	histone H3-K9 acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Predict GO terms from Neighborhoods
CC	GO:0044322	endoplasmic reticulum quality control compartment	IEP	Predict GO terms from Neighborhoods
BP	GO:0045292	mRNA cis splicing, via spliceosome	IEP	Predict GO terms from Neighborhoods
BP	GO:0045475	locomotor rhythm	IEP	Predict GO terms from Neighborhoods
BP	GO:0045815	epigenetic maintenance of chromatin in transcription-competent conformation	IEP	Predict GO terms from Neighborhoods
BP	GO:0045879	negative regulation of smoothened signaling pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:0046040	IMP metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046083	adenine metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046084	adenine biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0046112	nucleobase biosynthetic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0048286	lung alveolus development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048366	leaf development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048512	circadian behavior	IEP	Predict GO terms from Neighborhoods
BP	GO:0048564	photosystem I assembly	IEP	Predict GO terms from Neighborhoods
BP	GO:0048569	post-embryonic animal organ development	IEP	Predict GO terms from Neighborhoods
BP	GO:0048577	negative regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0048587	regulation of short-day photoperiodism, flowering	IEP	Predict GO terms from Neighborhoods
BP	GO:0050688	regulation of defense response to virus	IEP	Predict GO terms from Neighborhoods
BP	GO:0051276	chromosome organization	IEP	Predict GO terms from Neighborhoods
BP	GO:0061061	muscle structure development	IEP	Predict GO terms from Neighborhoods
BP	GO:0061647	histone H3-K9 modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0061988	karyosome formation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070076	histone lysine demethylation	IEP	Predict GO terms from Neighborhoods
BP	GO:0070193	synaptonemal complex organization	IEP	Predict GO terms from Neighborhoods
CC	GO:0070822	Sin3-type complex	IEP	Predict GO terms from Neighborhoods
MF	GO:0071558	histone H3-tri/di-methyl-lysine-27 demethylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:0072347	response to anesthetic	IEP	Predict GO terms from Neighborhoods
BP	GO:0072702	response to methyl methanesulfonate	IEP	Predict GO terms from Neighborhoods
BP	GO:0080156	mitochondrial mRNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Predict GO terms from Neighborhoods
BP	GO:0090615	mitochondrial mRNA processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0090617	mitochondrial mRNA 5'-end processing	IEP	Predict GO terms from Neighborhoods
BP	GO:0140053	mitochondrial gene expression	IEP	Predict GO terms from Neighborhoods
MF	GO:0140457	protein demethylase activity	IEP	Predict GO terms from Neighborhoods
BP	GO:1900864	mitochondrial RNA modification	IEP	Predict GO terms from Neighborhoods
BP	GO:1901984	negative regulation of protein acetylation	IEP	Predict GO terms from Neighborhoods
BP	GO:1904380	endoplasmic reticulum mannose trimming	IEP	Predict GO terms from Neighborhoods
BP	GO:1904382	mannose trimming involved in glycoprotein ERAD pathway	IEP	Predict GO terms from Neighborhoods
BP	GO:2000736	regulation of stem cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000737	negative regulation of stem cell differentiation	IEP	Predict GO terms from Neighborhoods
BP	GO:2000757	negative regulation of peptidyl-lysine acetylation	IEP	Predict GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR005814	Aminotrans_3	427	841
IPR027417	P-loop_NTPase	169	310
IPR015424	PyrdxlP-dep_Trfase	354	848

External Links

No external refs found!

SOLTUB.AGRIA.G00000023780

Expression Profile

Co-expression Networks

Functional Annotation