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  5. SOLTUB.AGRIA.G00000024911

SOLTUB.AGRIA.G00000024911


Description : Eukaryotic translation initiation factor 3 subunit K


Gene families : OG_02_0015737 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000024911
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_244


Type GO Term Name Evidence Source
BP GO:0001732 formation of cytoplasmic translation initiation complex IEA AHRD
MF GO:0003743 translation initiation factor activity IEA AHRD
CC GO:0005829 cytosol IEA AHRD
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEA AHRD
BP GO:0006446 regulation of translational initiation IEA AHRD
CC GO:0016282 eukaryotic 43S preinitiation complex IEA AHRD
CC GO:0033290 eukaryotic 48S preinitiation complex IEA AHRD
MF GO:0043022 ribosome binding IEA AHRD
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:0000124 SAGA complex IEP Predict GO terms from Neighborhoods
MF GO:0000171 ribonuclease MRP activity IEP Predict GO terms from Neighborhoods
CC GO:0000172 ribonuclease MRP complex IEP Predict GO terms from Neighborhoods
BP GO:0000244 spliceosomal tri-snRNP complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0000278 mitotic cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0000387 spliceosomal snRNP assembly IEP Predict GO terms from Neighborhoods
BP GO:0000395 mRNA 5'-splice site recognition IEP Predict GO terms from Neighborhoods
BP GO:0000447 endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000469 cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000470 maturation of LSU-rRNA IEP Predict GO terms from Neighborhoods
BP GO:0000478 endonucleolytic cleavage involved in rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0000479 endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP Predict GO terms from Neighborhoods
BP GO:0000491 small nucleolar ribonucleoprotein complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0000492 box C/D snoRNP assembly IEP Predict GO terms from Neighborhoods
BP GO:0001558 regulation of cell growth IEP Predict GO terms from Neighborhoods
BP GO:0001889 liver development IEP Predict GO terms from Neighborhoods
MF GO:0002039 p53 binding IEP Predict GO terms from Neighborhoods
BP GO:0002064 epithelial cell development IEP Predict GO terms from Neighborhoods
BP GO:0002181 cytoplasmic translation IEP Predict GO terms from Neighborhoods
MF GO:0003714 transcription corepressor activity IEP Predict GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003729 mRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Predict GO terms from Neighborhoods
MF GO:0004402 histone acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004518 nuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004519 endonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004521 endoribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004540 ribonuclease activity IEP Predict GO terms from Neighborhoods
MF GO:0004633 phosphopantothenoylcysteine decarboxylase activity IEP Predict GO terms from Neighborhoods
MF GO:0004864 protein phosphatase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP Predict GO terms from Neighborhoods
MF GO:0005080 protein kinase C binding IEP Predict GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Predict GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Predict GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Predict GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Predict GO terms from Neighborhoods
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP Predict GO terms from Neighborhoods
CC GO:0005774 vacuolar membrane IEP Predict GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Predict GO terms from Neighborhoods
CC GO:0005886 plasma membrane IEP Predict GO terms from Neighborhoods
CC GO:0005911 cell-cell junction IEP Predict GO terms from Neighborhoods
BP GO:0006164 purine nucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0006376 mRNA splice site selection IEP Predict GO terms from Neighborhoods
BP GO:0006412 translation IEP Predict GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
MF GO:0008080 N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0008097 5S rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0008340 determination of adult lifespan IEP Predict GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0009260 ribonucleotide biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0009506 plasmodesma IEP Predict GO terms from Neighborhoods
BP GO:0009892 negative regulation of metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0010181 FMN binding IEP Predict GO terms from Neighborhoods
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0010921 regulation of phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0010923 negative regulation of phosphatase activity IEP Predict GO terms from Neighborhoods
CC GO:0014069 postsynaptic density IEP Predict GO terms from Neighborhoods
CC GO:0015934 large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0015935 small ribosomal subunit IEP Predict GO terms from Neighborhoods
BP GO:0015936 coenzyme A metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0015937 coenzyme A biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0016020 membrane IEP Predict GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0016236 macroautophagy IEP Predict GO terms from Neighborhoods
MF GO:0016251 RNA polymerase II general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0016410 N-acyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0016482 cytosolic transport IEP Predict GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Predict GO terms from Neighborhoods
MF GO:0019208 phosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019212 phosphatase inhibitor activity IEP Predict GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Predict GO terms from Neighborhoods
MF GO:0019888 protein phosphatase regulator activity IEP Predict GO terms from Neighborhoods
MF GO:0019904 protein domain specific binding IEP Predict GO terms from Neighborhoods
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Predict GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0022625 cytosolic large ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0022627 cytosolic small ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0030054 cell junction IEP Predict GO terms from Neighborhoods
BP GO:0030097 hemopoiesis IEP Predict GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Predict GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Predict GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Predict GO terms from Neighborhoods
BP GO:0030707 ovarian follicle cell development IEP Predict GO terms from Neighborhoods
CC GO:0031090 organelle membrane IEP Predict GO terms from Neighborhoods
BP GO:0031099 regeneration IEP Predict GO terms from Neighborhoods
BP GO:0031100 animal organ regeneration IEP Predict GO terms from Neighborhoods
CC GO:0031248 protein acetyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0031324 negative regulation of cellular metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0031672 A band IEP Predict GO terms from Neighborhoods
BP GO:0032435 negative regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
BP GO:0033119 negative regulation of RNA splicing IEP Predict GO terms from Neighborhoods
BP GO:0033197 response to vitamin E IEP Predict GO terms from Neighborhoods
BP GO:0033273 response to vitamin IEP Predict GO terms from Neighborhoods
CC GO:0033276 transcription factor TFTC complex IEP Predict GO terms from Neighborhoods
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
MF GO:0034212 peptide N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:0034708 methyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:0035061 interchromatin granule IEP Predict GO terms from Neighborhoods
CC GO:0035097 histone methyltransferase complex IEP Predict GO terms from Neighborhoods
BP GO:0035303 regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035304 regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035305 negative regulation of dephosphorylation IEP Predict GO terms from Neighborhoods
BP GO:0035308 negative regulation of protein dephosphorylation IEP Predict GO terms from Neighborhoods
MF GO:0036002 pre-mRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0040019 positive regulation of embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0042177 negative regulation of protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:0042273 ribosomal large subunit biogenesis IEP Predict GO terms from Neighborhoods
CC GO:0042788 polysomal ribosome IEP Predict GO terms from Neighborhoods
MF GO:0042802 identical protein binding IEP Predict GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043200 response to amino acid IEP Predict GO terms from Neighborhoods
CC GO:0043226 organelle IEP Predict GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Predict GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predict GO terms from Neighborhoods
BP GO:0043603 cellular amide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predict GO terms from Neighborhoods
CC GO:0043679 axon terminus IEP Predict GO terms from Neighborhoods
BP GO:0043966 histone H3 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0044306 neuron projection terminus IEP Predict GO terms from Neighborhoods
CC GO:0044391 ribosomal subunit IEP Predict GO terms from Neighborhoods
CC GO:0044665 MLL1/2 complex IEP Predict GO terms from Neighborhoods
CC GO:0045202 synapse IEP Predict GO terms from Neighborhoods
BP GO:0045995 regulation of embryonic development IEP Predict GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Predict GO terms from Neighborhoods
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048025 negative regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048468 cell development IEP Predict GO terms from Neighborhoods
BP GO:0048513 animal organ development IEP Predict GO terms from Neighborhoods
BP GO:0048534 hematopoietic or lymphoid organ development IEP Predict GO terms from Neighborhoods
BP GO:0048599 oocyte development IEP Predict GO terms from Neighborhoods
BP GO:0048732 gland development IEP Predict GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Predict GO terms from Neighborhoods
BP GO:0050686 negative regulation of mRNA processing IEP Predict GO terms from Neighborhoods
MF GO:0050733 RS domain binding IEP Predict GO terms from Neighborhoods
MF GO:0051117 ATPase binding IEP Predict GO terms from Neighborhoods
BP GO:0051123 RNA polymerase II preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051248 negative regulation of protein metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0051726 regulation of cell cycle IEP Predict GO terms from Neighborhoods
BP GO:0060759 regulation of response to cytokine stimulus IEP Predict GO terms from Neighborhoods
BP GO:0060760 positive regulation of response to cytokine stimulus IEP Predict GO terms from Neighborhoods
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0070161 anchoring junction IEP Predict GO terms from Neighborhoods
MF GO:0070180 large ribosomal subunit rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:0070206 protein trimerization IEP Predict GO terms from Neighborhoods
BP GO:0070207 protein homotrimerization IEP Predict GO terms from Neighborhoods
CC GO:0070461 SAGA-type complex IEP Predict GO terms from Neighborhoods
BP GO:0070555 response to interleukin-1 IEP Predict GO terms from Neighborhoods
MF GO:0070742 C2H2 zinc finger domain binding IEP Predict GO terms from Neighborhoods
CC GO:0070761 pre-snoRNP complex IEP Predict GO terms from Neighborhoods
BP GO:0070897 transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0071339 MLL1 complex IEP Predict GO terms from Neighborhoods
CC GO:0071513 phosphopantothenoylcysteine decarboxylase complex IEP Predict GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predict GO terms from Neighborhoods
BP GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEP Predict GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Predict GO terms from Neighborhoods
BP GO:0097421 liver regeneration IEP Predict GO terms from Neighborhoods
CC GO:0098554 cytoplasmic side of endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0098556 cytoplasmic side of rough endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0098562 cytoplasmic side of membrane IEP Predict GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Predict GO terms from Neighborhoods
CC GO:0098793 presynapse IEP Predict GO terms from Neighborhoods
CC GO:0099572 postsynaptic specialization IEP Predict GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Predict GO terms from Neighborhoods
MF GO:0140223 general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Predict GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Predict GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1901796 regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1901797 negative regulation of signal transduction by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1901799 negative regulation of proteasomal protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901998 toxin transport IEP Predict GO terms from Neighborhoods
BP GO:1902065 response to L-glutamate IEP Predict GO terms from Neighborhoods
BP GO:1902165 regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1902166 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1902229 regulation of intrinsic apoptotic signaling pathway in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:1902230 negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage IEP Predict GO terms from Neighborhoods
BP GO:1902253 regulation of intrinsic apoptotic signaling pathway by p53 class mediator IEP Predict GO terms from Neighborhoods
BP GO:1902254 negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator IEP Predict GO terms from Neighborhoods
CC GO:1902493 acetyltransferase complex IEP Predict GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Predict GO terms from Neighborhoods
CC GO:1902555 endoribonuclease complex IEP Predict GO terms from Neighborhoods
BP GO:1903051 negative regulation of proteolysis involved in protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:1903312 negative regulation of mRNA metabolic process IEP Predict GO terms from Neighborhoods
CC GO:1905348 endonuclease complex IEP Predict GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Predict GO terms from Neighborhoods
CC GO:1990143 CoA-synthesizing protein complex IEP Predict GO terms from Neighborhoods
MF GO:1990932 5.8S rRNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000059 negative regulation of ubiquitin-dependent protein catabolic process IEP Predict GO terms from Neighborhoods
BP GO:2001021 negative regulation of response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:2001233 regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001234 negative regulation of apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001242 regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
BP GO:2001243 negative regulation of intrinsic apoptotic signaling pathway IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR016024 ARM-type_fold 17 137
IPR033464 CSN8_PSD8_EIF3K 70 194
IPR036390 WH_DNA-bd_sf 139 231
No external refs found!