| CC | GO:0000151 | ubiquitin ligase complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0000324 | fungal-type vacuole | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000429 | carbon catabolite regulation of transcription from RNA polymerase II promoter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000436 | carbon catabolite activation of transcription from RNA polymerase II promoter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0000769 | syncytium formation by mitosis without cytokinesis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000979 | RNA polymerase II core promoter sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0000993 | RNA polymerase II complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001046 | core promoter sequence-specific DNA binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001091 | RNA polymerase II general transcription initiation factor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001094 | TFIID-class transcription factor complex binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001098 | basal transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0001099 | basal RNA polymerase II transcription machinery binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001173 | DNA-templated transcriptional start site selection | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001174 | transcriptional start site selection at RNA polymerase II promoter | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0001558 | regulation of cell growth | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003712 | transcription coregulator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0003713 | transcription coactivator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004683 | calmodulin-dependent protein kinase activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005637 | nuclear inner membrane | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005654 | nucleoplasm | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005667 | transcription regulator complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006471 | protein ADP-ribosylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0006949 | syncytium formation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0007154 | cell communication | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008047 | enzyme activator activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0008134 | transcription factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009299 | mRNA transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009408 | response to heat | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0009960 | endosperm development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010035 | response to inorganic substance | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010071 | root meristem specification | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010098 | suspensor development | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010555 | response to mannitol | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010677 | negative regulation of cellular carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0010769 | regulation of cell morphogenesis involved in differentiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015175 | neutral amino acid transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0015334 | high-affinity oligopeptide transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015801 | aromatic amino acid transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0015804 | neutral amino acid transport | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016004 | phospholipase activator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016032 | viral process | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0016251 | RNA polymerase II general transcription initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0016602 | CCAAT-binding factor complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0016925 | protein sumoylation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0017025 | TBP-class protein binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0017053 | transcription repressor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0017054 | negative cofactor 2 complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0019083 | viral transcription | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0030234 | enzyme regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031001 | response to brefeldin A | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031155 | regulation of reproductive fruiting body development | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0031252 | cell leading edge | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031668 | cellular response to extracellular stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0031670 | cellular response to nutrient | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0033293 | monocarboxylic acid binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0034605 | cellular response to heat | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0035519 | protein K29-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0036003 | positive regulation of transcription from RNA polymerase II promoter in response to stress | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0036477 | somatodendritic compartment | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0040008 | regulation of growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0042789 | mRNA transcription by RNA polymerase II | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043162 | ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0043175 | RNA polymerase core enzyme binding | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043388 | positive regulation of DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0043457 | regulation of cellular respiration | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044001 | migration in host | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044093 | positive regulation of molecular function | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0044314 | protein K27-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0044877 | protein-containing complex binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045446 | endothelial cell differentiation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045912 | negative regulation of carbohydrate metabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045990 | carbon catabolite regulation of transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0045991 | carbon catabolite activation of transcription | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046739 | transport of virus in multicellular host | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046740 | transport of virus in host, cell to cell | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0046794 | transport of virus | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0046966 | nuclear thyroid hormone receptor binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0048032 | galacturonate binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0048638 | regulation of developmental growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051098 | regulation of binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051099 | positive regulation of binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051101 | regulation of DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051123 | RNA polymerase II preinitiation complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051510 | regulation of unidimensional cell growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051665 | membrane raft localization | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0051668 | localization within membrane | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0055088 | lipid homeostasis | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0060229 | lipase activator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0061408 | positive regulation of transcription from RNA polymerase II promoter in response to heat stress | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061631 | ubiquitin conjugating enzyme activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0061650 | ubiquitin-like protein conjugating enzyme activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0065009 | regulation of molecular function | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0070628 | proteasome binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070897 | transcription preinitiation complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0070979 | protein K11-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071496 | cellular response to external stimulus | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071629 | cytoplasm protein quality control by the ubiquitin-proteasome system | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071705 | nitrogen compound transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0071916 | dipeptide transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072344 | rescue of stalled ribosome | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0072671 | mitochondria-associated ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0075260 | regulation of spore-bearing organ development | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0080054 | low-affinity nitrate transmembrane transporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0080092 | regulation of pollen tube growth | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0085020 | protein K6-linked ubiquitination | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090408 | phloem nitrate loading | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090421 | embryonic meristem initiation | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0090448 | glucosinolate:proton symporter activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090449 | phloem glucosinolate loading | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090571 | RNA polymerase II transcription repressor complex | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090601 | enucleation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090602 | sieve element enucleation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0090630 | activation of GTPase activity | IEP | Predict GO terms from Neighborhoods |
| CC | GO:0097550 | transcription preinitiation complex | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0097602 | cullin family protein binding | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0098772 | molecular function regulator activity | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0110126 | phloem loading | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140223 | general transcription initiation factor activity | IEP | Predict GO terms from Neighborhoods |
| MF | GO:0140296 | general transcription initiation factor binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:0140455 | cytoplasm protein quality control | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1901349 | glucosinolate transport | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902265 | abscisic acid homeostasis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1902890 | regulation of root hair elongation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904796 | regulation of core promoter binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1904798 | positive regulation of core promoter binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990114 | RNA polymerase II core complex assembly | IEP | Predict GO terms from Neighborhoods |
| BP | GO:1990116 | ribosome-associated ubiquitin-dependent protein catabolic process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000241 | regulation of reproductive process | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000306 | positive regulation of photomorphogenesis | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000434 | regulation of protein neddylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000436 | positive regulation of protein neddylation | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000677 | regulation of transcription regulatory region DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000679 | positive regulation of transcription regulatory region DNA binding | IEP | Predict GO terms from Neighborhoods |
| BP | GO:2000905 | negative regulation of starch metabolic process | IEP | Predict GO terms from Neighborhoods |