Coexpression cluster: Cluster_89 (HCCA Clusters (HRR 50 & PCC 0.5))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009606 tropism 16.67% (10/60) 4.05 0.0 1e-06
GO:0009630 gravitropism 15.0% (9/60) 4.1 0.0 2e-06
GO:0009629 response to gravity 15.0% (9/60) 3.87 0.0 4e-06
GO:0009653 anatomical structure morphogenesis 30.0% (18/60) 1.75 3e-06 0.000773
GO:1900057 positive regulation of leaf senescence 8.33% (5/60) 4.28 6e-06 0.001145
GO:1900055 regulation of leaf senescence 10.0% (6/60) 3.74 6e-06 0.001324
GO:0019897 extrinsic component of plasma membrane 6.67% (4/60) 4.36 4.5e-05 0.0062
GO:0005915 zonula adherens 3.33% (2/60) 7.35 6.4e-05 0.006461
GO:0045218 zonula adherens maintenance 3.33% (2/60) 7.35 6.4e-05 0.006461
GO:0090136 epithelial cell-cell adhesion 3.33% (2/60) 7.35 6.4e-05 0.006461
GO:0009734 auxin-activated signaling pathway 10.0% (6/60) 3.23 4.4e-05 0.006891
GO:0050896 response to stimulus 63.33% (38/60) 0.71 9.9e-05 0.007281
GO:0010101 post-embryonic root morphogenesis 6.67% (4/60) 4.07 9.8e-05 0.00768
GO:0010102 lateral root morphogenesis 6.67% (4/60) 4.09 9.3e-05 0.007866
GO:0090697 post-embryonic plant organ morphogenesis 8.33% (5/60) 3.46 9.2e-05 0.008453
GO:0005634 nucleus 33.33% (20/60) 1.23 0.000152 0.009283
GO:0034334 adherens junction maintenance 3.33% (2/60) 6.76 0.000151 0.009815
GO:0045217 cell-cell junction maintenance 3.33% (2/60) 6.76 0.000151 0.009815
GO:1900140 regulation of seedling development 10.0% (6/60) 2.84 0.000193 0.011186
GO:0010202 response to low fluence red light stimulus 5.0% (3/60) 4.65 0.000241 0.012072
GO:0005912 adherens junction 3.33% (2/60) 6.44 0.00024 0.012604
GO:1905392 plant organ morphogenesis 11.67% (7/60) 2.47 0.000264 0.012644
GO:2000012 regulation of auxin polar transport 6.67% (4/60) 3.75 0.000231 0.012719
GO:0010015 root morphogenesis 8.33% (5/60) 3.08 0.000316 0.01394
GO:0009611 response to wounding 15.0% (9/60) 2.04 0.000304 0.013956
GO:0031534 minus-end directed microtubule sliding 3.33% (2/60) 6.03 0.000432 0.015886
GO:0034332 adherens junction organization 3.33% (2/60) 6.1 0.00039 0.015902
GO:0090698 post-embryonic plant morphogenesis 10.0% (6/60) 2.66 0.000376 0.015953
GO:0080086 stamen filament development 5.0% (3/60) 4.36 0.00043 0.016356
GO:0009628 response to abiotic stimulus 38.33% (23/60) 1.0 0.000428 0.016847
GO:0008569 minus-end-directed microtubule motor activity 3.33% (2/60) 5.89 0.000525 0.018654
GO:0034331 cell junction maintenance 3.33% (2/60) 5.82 0.000574 0.019173
GO:0030307 positive regulation of cell growth 6.67% (4/60) 3.41 0.000558 0.019202
GO:0043954 cellular component maintenance 3.33% (2/60) 5.76 0.000626 0.020281
GO:0009605 response to external stimulus 38.33% (23/60) 0.94 0.000761 0.023972
GO:0009645 response to low light intensity stimulus 5.0% (3/60) 3.96 0.000979 0.029957
GO:0048580 regulation of post-embryonic development 15.0% (9/60) 1.78 0.001106 0.032927
GO:0018958 phenol-containing compound metabolic process 6.67% (4/60) 3.11 0.001212 0.033394
GO:0019898 extrinsic component of membrane 6.67% (4/60) 3.13 0.001154 0.033468
GO:0009753 response to jasmonic acid 10.0% (6/60) 2.34 0.001194 0.033726
GO:0051012 microtubule sliding 3.33% (2/60) 5.22 0.001334 0.035866
GO:0009416 response to light stimulus 20.0% (12/60) 1.42 0.001395 0.036594
GO:0046189 phenol-containing compound biosynthetic process 5.0% (3/60) 3.73 0.001524 0.039062
GO:0070542 response to fatty acid 10.0% (6/60) 2.23 0.001712 0.040129
GO:0010588 cotyledon vascular tissue pattern formation 5.0% (3/60) 3.7 0.001615 0.040444
GO:0009860 pollen tube growth 8.33% (5/60) 2.54 0.001693 0.040554
GO:0010229 inflorescence development 5.0% (3/60) 3.68 0.001677 0.04107
GO:0042802 identical protein binding 20.0% (12/60) 1.38 0.001832 0.042069
GO:0048364 root development 11.67% (7/60) 1.97 0.002012 0.044339
GO:0009314 response to radiation 20.0% (12/60) 1.36 0.002065 0.044621
GO:0009641 shade avoidance 5.0% (3/60) 3.59 0.002011 0.045225
GO:0009725 response to hormone 25.0% (15/60) 1.16 0.00214 0.045353
GO:0045216 cell-cell junction organization 3.33% (2/60) 4.79 0.002396 0.049815
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_103 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_129 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_137 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_144 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_161 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_208 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_210 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_237 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_253 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_329 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_4 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_8 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_29 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_43 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_52 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_59 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_88 0.008 Orthogroups with 8 Potato genotypes Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms