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  5. SOLTUB.AGRIA.G00000022993

SOLTUB.AGRIA.G00000022993


Description : Ubiquitin-associated/translation elongation factor EF1B protein


Gene families : OG_02_0015419 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000022993
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_134


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000124 SAGA complex IEP Predict GO terms from Neighborhoods
CC GO:0000791 euchromatin IEP Predict GO terms from Neighborhoods
BP GO:0001666 response to hypoxia IEP Predict GO terms from Neighborhoods
BP GO:0001818 negative regulation of cytokine production IEP Predict GO terms from Neighborhoods
BP GO:0002052 positive regulation of neuroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0002088 lens development in camera-type eye IEP Predict GO terms from Neighborhoods
BP GO:0003128 heart field specification IEP Predict GO terms from Neighborhoods
BP GO:0003139 secondary heart field specification IEP Predict GO terms from Neighborhoods
BP GO:0003207 cardiac chamber formation IEP Predict GO terms from Neighborhoods
BP GO:0003211 cardiac ventricle formation IEP Predict GO terms from Neighborhoods
BP GO:0003219 cardiac right ventricle formation IEP Predict GO terms from Neighborhoods
BP GO:0003407 neural retina development IEP Predict GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Predict GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Predict GO terms from Neighborhoods
MF GO:0003713 transcription coactivator activity IEP Predict GO terms from Neighborhoods
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predict GO terms from Neighborhoods
MF GO:0004839 ubiquitin activating enzyme activity IEP Predict GO terms from Neighborhoods
CC GO:0005667 transcription regulator complex IEP Predict GO terms from Neighborhoods
CC GO:0005669 transcription factor TFIID complex IEP Predict GO terms from Neighborhoods
CC GO:0005789 endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
CC GO:0005798 Golgi-associated vesicle IEP Predict GO terms from Neighborhoods
CC GO:0005801 cis-Golgi network IEP Predict GO terms from Neighborhoods
CC GO:0005813 centrosome IEP Predict GO terms from Neighborhoods
CC GO:0005815 microtubule organizing center IEP Predict GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006305 DNA alkylation IEP Predict GO terms from Neighborhoods
BP GO:0006306 DNA methylation IEP Predict GO terms from Neighborhoods
BP GO:0006337 nucleosome disassembly IEP Predict GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP Predict GO terms from Neighborhoods
BP GO:0006974 cellular response to DNA damage stimulus IEP Predict GO terms from Neighborhoods
BP GO:0007406 negative regulation of neuroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:0007447 imaginal disc pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0007450 dorsal/ventral pattern formation, imaginal disc IEP Predict GO terms from Neighborhoods
MF GO:0008134 transcription factor binding IEP Predict GO terms from Neighborhoods
MF GO:0008143 poly(A) binding IEP Predict GO terms from Neighborhoods
BP GO:0008284 positive regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0008285 negative regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predict GO terms from Neighborhoods
BP GO:0009953 dorsal/ventral pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0010092 specification of animal organ identity IEP Predict GO terms from Neighborhoods
BP GO:0010507 negative regulation of autophagy IEP Predict GO terms from Neighborhoods
BP GO:0010528 regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010529 negative regulation of transposition IEP Predict GO terms from Neighborhoods
BP GO:0010721 negative regulation of cell development IEP Predict GO terms from Neighborhoods
BP GO:0016241 regulation of macroautophagy IEP Predict GO terms from Neighborhoods
BP GO:0016242 negative regulation of macroautophagy IEP Predict GO terms from Neighborhoods
MF GO:0016251 RNA polymerase II general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
CC GO:0016514 SWI/SNF complex IEP Predict GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Predict GO terms from Neighborhoods
BP GO:0016598 protein arginylation IEP Predict GO terms from Neighborhoods
MF GO:0017025 TBP-class protein binding IEP Predict GO terms from Neighborhoods
BP GO:0017145 stem cell division IEP Predict GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Predict GO terms from Neighborhoods
MF GO:0019780 FAT10 activating enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0019782 ISG15 activating enzyme activity IEP Predict GO terms from Neighborhoods
MF GO:0019905 syntaxin binding IEP Predict GO terms from Neighborhoods
BP GO:0021764 amygdala development IEP Predict GO terms from Neighborhoods
BP GO:0021766 hippocampus development IEP Predict GO terms from Neighborhoods
BP GO:0030218 erythrocyte differentiation IEP Predict GO terms from Neighborhoods
MF GO:0030371 translation repressor activity IEP Predict GO terms from Neighborhoods
MF GO:0030374 nuclear receptor coactivator activity IEP Predict GO terms from Neighborhoods
CC GO:0030867 rough endoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0031445 regulation of heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0031453 positive regulation of heterochromatin formation IEP Predict GO terms from Neighborhoods
BP GO:0032020 ISG15-protein conjugation IEP Predict GO terms from Neighborhoods
BP GO:0032069 regulation of nuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0032075 positive regulation of nuclease activity IEP Predict GO terms from Neighborhoods
CC GO:0032586 protein storage vacuole membrane IEP Predict GO terms from Neighborhoods
BP GO:0032986 protein-DNA complex disassembly IEP Predict GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Predict GO terms from Neighborhoods
CC GO:0033017 sarcoplasmic reticulum membrane IEP Predict GO terms from Neighborhoods
BP GO:0033119 negative regulation of RNA splicing IEP Predict GO terms from Neighborhoods
CC GO:0033276 transcription factor TFTC complex IEP Predict GO terms from Neighborhoods
BP GO:0034063 stress granule assembly IEP Predict GO terms from Neighborhoods
CC GO:0034657 GID complex IEP Predict GO terms from Neighborhoods
CC GO:0035060 brahma complex IEP Predict GO terms from Neighborhoods
MF GO:0035064 methylated histone binding IEP Predict GO terms from Neighborhoods
BP GO:0035222 wing disc pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0035330 regulation of hippo signaling IEP Predict GO terms from Neighborhoods
BP GO:0035332 positive regulation of hippo signaling IEP Predict GO terms from Neighborhoods
MF GO:0035925 mRNA 3'-UTR AU-rich region binding IEP Predict GO terms from Neighborhoods
BP GO:0036293 response to decreased oxygen levels IEP Predict GO terms from Neighborhoods
BP GO:0042127 regulation of cell population proliferation IEP Predict GO terms from Neighborhoods
BP GO:0042692 muscle cell differentiation IEP Predict GO terms from Neighborhoods
BP GO:0043966 histone H3 acetylation IEP Predict GO terms from Neighborhoods
BP GO:0044088 regulation of vacuole organization IEP Predict GO terms from Neighborhoods
BP GO:0044260 cellular macromolecule metabolic process IEP Predict GO terms from Neighborhoods
MF GO:0044325 transmembrane transporter binding IEP Predict GO terms from Neighborhoods
BP GO:0045292 mRNA cis splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Predict GO terms from Neighborhoods
CC GO:0046695 SLIK (SAGA-like) complex IEP Predict GO terms from Neighborhoods
MF GO:0047485 protein N-terminus binding IEP Predict GO terms from Neighborhoods
BP GO:0048025 negative regulation of mRNA splicing, via spliceosome IEP Predict GO terms from Neighborhoods
BP GO:0048190 wing disc dorsal/ventral pattern formation IEP Predict GO terms from Neighborhoods
BP GO:0048821 erythrocyte development IEP Predict GO terms from Neighborhoods
BP GO:0050686 negative regulation of mRNA processing IEP Predict GO terms from Neighborhoods
BP GO:0050768 negative regulation of neurogenesis IEP Predict GO terms from Neighborhoods
BP GO:0050848 regulation of calcium-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0050850 positive regulation of calcium-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0051123 RNA polymerase II preinitiation complex assembly IEP Predict GO terms from Neighborhoods
BP GO:0051209 release of sequestered calcium ion into cytosol IEP Predict GO terms from Neighborhoods
BP GO:0051282 regulation of sequestering of calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051283 negative regulation of sequestering of calcium ion IEP Predict GO terms from Neighborhoods
BP GO:0051961 negative regulation of nervous system development IEP Predict GO terms from Neighborhoods
MF GO:0060090 molecular adaptor activity IEP Predict GO terms from Neighborhoods
BP GO:0060628 regulation of ER to Golgi vesicle-mediated transport IEP Predict GO terms from Neighborhoods
BP GO:0060700 regulation of ribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:0060996 dendritic spine development IEP Predict GO terms from Neighborhoods
BP GO:0061515 myeloid cell development IEP Predict GO terms from Neighborhoods
MF GO:0061629 RNA polymerase II-specific DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
CC GO:0070461 SAGA-type complex IEP Predict GO terms from Neighborhoods
BP GO:0070884 regulation of calcineurin-NFAT signaling cascade IEP Predict GO terms from Neighborhoods
BP GO:0070886 positive regulation of calcineurin-NFAT signaling cascade IEP Predict GO terms from Neighborhoods
BP GO:0070897 transcription preinitiation complex assembly IEP Predict GO terms from Neighborhoods
CC GO:0071564 npBAF complex IEP Predict GO terms from Neighborhoods
CC GO:0071565 nBAF complex IEP Predict GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex subunit organization IEP Predict GO terms from Neighborhoods
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Predict GO terms from Neighborhoods
CC GO:0097165 nuclear stress granule IEP Predict GO terms from Neighborhoods
BP GO:0097553 calcium ion transmembrane import into cytosol IEP Predict GO terms from Neighborhoods
BP GO:0106056 regulation of calcineurin-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0106058 positive regulation of calcineurin-mediated signaling IEP Predict GO terms from Neighborhoods
BP GO:0120261 regulation of heterochromatin organization IEP Predict GO terms from Neighborhoods
BP GO:0120263 positive regulation of heterochromatin organization IEP Predict GO terms from Neighborhoods
MF GO:0140034 methylation-dependent protein binding IEP Predict GO terms from Neighborhoods
MF GO:0140223 general transcription initiation factor activity IEP Predict GO terms from Neighborhoods
MF GO:0140296 general transcription initiation factor binding IEP Predict GO terms from Neighborhoods
MF GO:0140297 DNA-binding transcription factor binding IEP Predict GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Predict GO terms from Neighborhoods
BP GO:1901917 regulation of exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1901919 positive regulation of exoribonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1901998 toxin transport IEP Predict GO terms from Neighborhoods
BP GO:1902116 negative regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902531 regulation of intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:1902533 positive regulation of intracellular signal transduction IEP Predict GO terms from Neighborhoods
BP GO:1902692 regulation of neuroblast proliferation IEP Predict GO terms from Neighborhoods
BP GO:1902902 negative regulation of autophagosome assembly IEP Predict GO terms from Neighborhoods
MF GO:1903231 mRNA base-pairing post-transcriptional repressor activity IEP Predict GO terms from Neighborhoods
BP GO:1905269 positive regulation of chromatin organization IEP Predict GO terms from Neighborhoods
CC GO:1905368 peptidase complex IEP Predict GO terms from Neighborhoods
BP GO:1905777 regulation of exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:1905779 positive regulation of exonuclease activity IEP Predict GO terms from Neighborhoods
BP GO:2000024 regulation of leaf development IEP Predict GO terms from Neighborhoods
BP GO:2000177 regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000178 negative regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000179 positive regulation of neural precursor cell proliferation IEP Predict GO terms from Neighborhoods
BP GO:2000785 regulation of autophagosome assembly IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009060 UBA-like_sf 180 223
No external refs found!