SOLTUB.AGRIA.G00000003747


Description : nuclear factor Y, subunit C11


Gene families : OG_02_0022023 (Orthogroups with 8 Potato genotypes) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR Network (HRR 50 & PCC 0.5): SOLTUB.AGRIA.G00000003747
Cluster HCCA Clusters (HRR 50 & PCC 0.5): Cluster_6


Type GO Term Name Evidence Source
BP GO:0000122 negative regulation of transcription by RNA polymerase II IEA AHRD
BP GO:0000436 carbon catabolite activation of transcription from RNA polymerase II promoter IEA AHRD
MF GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA AHRD
MF GO:0001046 core promoter sequence-specific DNA binding IEA AHRD
MF GO:0001091 RNA polymerase II general transcription initiation factor binding IEA AHRD
MF GO:0003682 chromatin binding IEA AHRD
MF GO:0003700 DNA-binding transcription factor activity IEA AHRD
MF GO:0003713 transcription coactivator activity IEA AHRD
MF GO:0003714 transcription corepressor activity IEA AHRD
CC GO:0005694 chromosome IEA AHRD
CC GO:0005829 cytosol IEA AHRD
BP GO:0009738 abscisic acid-activated signaling pathway IEA AHRD
BP GO:0009740 gibberellic acid mediated signaling pathway IEA AHRD
BP GO:0010029 regulation of seed germination IEA AHRD
MF GO:0016251 RNA polymerase II general transcription initiation factor activity IEA AHRD
CC GO:0016602 CCAAT-binding factor complex IEA AHRD
MF GO:0017025 TBP-class protein binding IEA AHRD
CC GO:0017054 negative cofactor 2 complex IEA AHRD
MF GO:0042802 identical protein binding IEA AHRD
BP GO:0043457 regulation of cellular respiration IEA AHRD
BP GO:0048579 negative regulation of long-day photoperiodism, flowering IEA AHRD
BP GO:0051123 RNA polymerase II preinitiation complex assembly IEA AHRD
BP GO:0051247 positive regulation of protein metabolic process IEA AHRD
BP GO:0061408 positive regulation of transcription from RNA polymerase II promoter in response to heat stress IEA AHRD
BP GO:2000306 positive regulation of photomorphogenesis IEA AHRD
BP GO:2000905 negative regulation of starch metabolic process IEA AHRD
Type GO Term Name Evidence Source
MF GO:0000010 trans-hexaprenyltranstransferase activity IEP Predict GO terms from Neighborhoods
BP GO:0000132 establishment of mitotic spindle orientation IEP Predict GO terms from Neighborhoods
CC GO:0000776 kinetochore IEP Predict GO terms from Neighborhoods
MF GO:0001094 TFIID-class transcription factor complex binding IEP Predict GO terms from Neighborhoods
BP GO:0002791 regulation of peptide secretion IEP Predict GO terms from Neighborhoods
BP GO:0002793 positive regulation of peptide secretion IEP Predict GO terms from Neighborhoods
MF GO:0004311 farnesyltranstransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004337 geranyltranstransferase activity IEP Predict GO terms from Neighborhoods
MF GO:0004659 prenyltransferase activity IEP Predict GO terms from Neighborhoods
CC GO:0005787 signal peptidase complex IEP Predict GO terms from Neighborhoods
CC GO:0005814 centriole IEP Predict GO terms from Neighborhoods
CC GO:0005868 cytoplasmic dynein complex IEP Predict GO terms from Neighborhoods
CC GO:0005874 microtubule IEP Predict GO terms from Neighborhoods
CC GO:0005930 axoneme IEP Predict GO terms from Neighborhoods
BP GO:0006144 purine nucleobase metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006465 signal peptide processing IEP Predict GO terms from Neighborhoods
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0007097 nuclear migration IEP Predict GO terms from Neighborhoods
BP GO:0007290 spermatid nucleus elongation IEP Predict GO terms from Neighborhoods
BP GO:0007291 sperm individualization IEP Predict GO terms from Neighborhoods
BP GO:0007349 cellularization IEP Predict GO terms from Neighborhoods
BP GO:0007476 imaginal disc-derived wing morphogenesis IEP Predict GO terms from Neighborhoods
CC GO:0008180 COP9 signalosome IEP Predict GO terms from Neighborhoods
BP GO:0008407 chaeta morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Predict GO terms from Neighborhoods
BP GO:0009554 megasporogenesis IEP Predict GO terms from Neighborhoods
BP GO:0009695 jasmonic acid biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0010005 cortical microtubule, transverse to long axis IEP Predict GO terms from Neighborhoods
BP GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway IEP Predict GO terms from Neighborhoods
BP GO:0010196 nonphotochemical quenching IEP Predict GO terms from Neighborhoods
BP GO:0010236 plastoquinone biosynthetic process IEP Predict GO terms from Neighborhoods
CC GO:0010319 stromule IEP Predict GO terms from Neighborhoods
BP GO:0010321 regulation of vegetative phase change IEP Predict GO terms from Neighborhoods
BP GO:0014041 regulation of neuron maturation IEP Predict GO terms from Neighborhoods
BP GO:0014042 positive regulation of neuron maturation IEP Predict GO terms from Neighborhoods
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Predict GO terms from Neighborhoods
MF GO:0015193 L-proline transmembrane transporter activity IEP Predict GO terms from Neighborhoods
BP GO:0015804 neutral amino acid transport IEP Predict GO terms from Neighborhoods
BP GO:0015824 proline transport IEP Predict GO terms from Neighborhoods
CC GO:0016459 myosin complex IEP Predict GO terms from Neighborhoods
CC GO:0016461 unconventional myosin complex IEP Predict GO terms from Neighborhoods
MF GO:0019135 deoxyhypusine monooxygenase activity IEP Predict GO terms from Neighborhoods
BP GO:0019954 asexual reproduction IEP Predict GO terms from Neighborhoods
BP GO:0021510 spinal cord development IEP Predict GO terms from Neighborhoods
BP GO:0021954 central nervous system neuron development IEP Predict GO terms from Neighborhoods
MF GO:0030235 nitric-oxide synthase regulator activity IEP Predict GO terms from Neighborhoods
CC GO:0030286 dynein complex IEP Predict GO terms from Neighborhoods
BP GO:0030436 asexual sporulation IEP Predict GO terms from Neighborhoods
BP GO:0030473 nuclear migration along microtubule IEP Predict GO terms from Neighborhoods
BP GO:0031344 regulation of cell projection organization IEP Predict GO terms from Neighborhoods
CC GO:0031475 myosin V complex IEP Predict GO terms from Neighborhoods
BP GO:0032024 positive regulation of insulin secretion IEP Predict GO terms from Neighborhoods
CC GO:0032476 decaprenyl diphosphate synthase complex IEP Predict GO terms from Neighborhoods
CC GO:0032838 plasma membrane bounded cell projection cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0033274 response to vitamin B2 IEP Predict GO terms from Neighborhoods
BP GO:0034293 sexual sporulation IEP Predict GO terms from Neighborhoods
CC GO:0034399 nuclear periphery IEP Predict GO terms from Neighborhoods
BP GO:0034453 microtubule anchoring IEP Predict GO terms from Neighborhoods
BP GO:0034454 microtubule anchoring at centrosome IEP Predict GO terms from Neighborhoods
BP GO:0035071 salivary gland cell autophagic cell death IEP Predict GO terms from Neighborhoods
BP GO:0035107 appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035114 imaginal disc-derived appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035120 post-embryonic appendage morphogenesis IEP Predict GO terms from Neighborhoods
BP GO:0035524 proline transmembrane transport IEP Predict GO terms from Neighborhoods
BP GO:0035721 intraciliary retrograde transport IEP Predict GO terms from Neighborhoods
BP GO:0035774 positive regulation of insulin secretion involved in cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0040001 establishment of mitotic spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0042073 intraciliary transport IEP Predict GO terms from Neighborhoods
BP GO:0042133 neurotransmitter metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0043388 positive regulation of DNA binding IEP Predict GO terms from Neighborhoods
BP GO:0043934 sporulation IEP Predict GO terms from Neighborhoods
BP GO:0043935 sexual sporulation resulting in formation of a cellular spore IEP Predict GO terms from Neighborhoods
BP GO:0044458 motile cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:0045019 negative regulation of nitric oxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045337 farnesyl diphosphate biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045428 regulation of nitric oxide biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:0045446 endothelial cell differentiation IEP Predict GO terms from Neighborhoods
MF GO:0045505 dynein intermediate chain binding IEP Predict GO terms from Neighborhoods
BP GO:0045724 positive regulation of cilium assembly IEP Predict GO terms from Neighborhoods
MF GO:0046423 allene-oxide cyclase activity IEP Predict GO terms from Neighborhoods
BP GO:0046719 regulation by virus of viral protein levels in host cell IEP Predict GO terms from Neighborhoods
BP GO:0046883 regulation of hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0046887 positive regulation of hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0048102 autophagic cell death IEP Predict GO terms from Neighborhoods
BP GO:0048315 conidium formation IEP Predict GO terms from Neighborhoods
BP GO:0050714 positive regulation of protein secretion IEP Predict GO terms from Neighborhoods
BP GO:0050796 regulation of insulin secretion IEP Predict GO terms from Neighborhoods
BP GO:0051017 actin filament bundle assembly IEP Predict GO terms from Neighborhoods
BP GO:0051293 establishment of spindle localization IEP Predict GO terms from Neighborhoods
BP GO:0051294 establishment of spindle orientation IEP Predict GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Predict GO terms from Neighborhoods
BP GO:0051647 nucleus localization IEP Predict GO terms from Neighborhoods
BP GO:0051653 spindle localization IEP Predict GO terms from Neighborhoods
MF GO:0051959 dynein light intermediate chain binding IEP Predict GO terms from Neighborhoods
MF GO:0052923 all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity IEP Predict GO terms from Neighborhoods
MF GO:0052924 all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity IEP Predict GO terms from Neighborhoods
BP GO:0060491 regulation of cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0061178 regulation of insulin secretion involved in cellular response to glucose stimulus IEP Predict GO terms from Neighborhoods
BP GO:0061572 actin filament bundle organization IEP Predict GO terms from Neighborhoods
BP GO:0072384 organelle transport along microtubule IEP Predict GO terms from Neighborhoods
BP GO:0072393 microtubule anchoring at microtubule organizing center IEP Predict GO terms from Neighborhoods
BP GO:0080164 regulation of nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:0080186 developmental vegetative growth IEP Predict GO terms from Neighborhoods
BP GO:0090087 regulation of peptide transport IEP Predict GO terms from Neighborhoods
BP GO:0090276 regulation of peptide hormone secretion IEP Predict GO terms from Neighborhoods
BP GO:0090277 positive regulation of peptide hormone secretion IEP Predict GO terms from Neighborhoods
MF GO:0097110 scaffold protein binding IEP Predict GO terms from Neighborhoods
MF GO:0097269 all-trans-decaprenyl-diphosphate synthase activity IEP Predict GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Predict GO terms from Neighborhoods
CC GO:0097542 ciliary tip IEP Predict GO terms from Neighborhoods
MF GO:0097718 disordered domain specific binding IEP Predict GO terms from Neighborhoods
CC GO:0097730 non-motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0097731 9+0 non-motile cilium IEP Predict GO terms from Neighborhoods
CC GO:0099513 polymeric cytoskeletal fiber IEP Predict GO terms from Neighborhoods
CC GO:0101003 ficolin-1-rich granule membrane IEP Predict GO terms from Neighborhoods
BP GO:0120032 regulation of plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120034 positive regulation of plasma membrane bounded cell projection assembly IEP Predict GO terms from Neighborhoods
BP GO:0120035 regulation of plasma membrane bounded cell projection organization IEP Predict GO terms from Neighborhoods
CC GO:0120111 neuron projection cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:0120161 regulation of cold-induced thermogenesis IEP Predict GO terms from Neighborhoods
BP GO:0120163 negative regulation of cold-induced thermogenesis IEP Predict GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Predict GO terms from Neighborhoods
BP GO:1902017 regulation of cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902117 positive regulation of organelle assembly IEP Predict GO terms from Neighborhoods
BP GO:1902667 regulation of axon guidance IEP Predict GO terms from Neighborhoods
BP GO:1902767 isoprenoid biosynthetic process via mevalonate IEP Predict GO terms from Neighborhoods
BP GO:1902855 regulation of non-motile cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1902857 positive regulation of non-motile cilium assembly IEP Predict GO terms from Neighborhoods
BP GO:1903429 regulation of cell maturation IEP Predict GO terms from Neighborhoods
BP GO:1903431 positive regulation of cell maturation IEP Predict GO terms from Neighborhoods
CC GO:1904115 axon cytoplasm IEP Predict GO terms from Neighborhoods
BP GO:1904406 negative regulation of nitric oxide metabolic process IEP Predict GO terms from Neighborhoods
BP GO:1904799 regulation of neuron remodeling IEP Predict GO terms from Neighborhoods
BP GO:1904801 positive regulation of neuron remodeling IEP Predict GO terms from Neighborhoods
BP GO:1990066 energy quenching IEP Predict GO terms from Neighborhoods
MF GO:1990825 sequence-specific mRNA binding IEP Predict GO terms from Neighborhoods
BP GO:2000025 regulation of leaf formation IEP Predict GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 8 71
IPR009072 Histone-fold 4 100
No external refs found!