Coexpression cluster: Cluster_170 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0033106 cis-Golgi network membrane 8.7% (4/46) 7.09 0.0 1.6e-05
GO:1903792 negative regulation of anion transport 8.7% (4/46) 6.15 0.0 6.1e-05
GO:1903960 negative regulation of anion transmembrane transport 8.7% (4/46) 6.15 0.0 6.1e-05
GO:0010360 negative regulation of anion channel activity 8.7% (4/46) 6.24 0.0 9.4e-05
GO:0048838 release of seed from dormancy 6.52% (3/46) 7.07 1e-06 0.000162
GO:0097438 exit from dormancy 6.52% (3/46) 7.07 1e-06 0.000162
GO:1902039 negative regulation of seed dormancy process 6.52% (3/46) 7.07 1e-06 0.000162
GO:0032410 negative regulation of transporter activity 8.7% (4/46) 5.29 3e-06 0.0003
GO:0032413 negative regulation of ion transmembrane transporter activity 8.7% (4/46) 5.29 3e-06 0.0003
GO:0034763 negative regulation of transmembrane transport 8.7% (4/46) 5.0 8e-06 0.000456
GO:0043271 negative regulation of ion transport 8.7% (4/46) 5.0 8e-06 0.000456
GO:0010205 photoinhibition 6.52% (3/46) 6.19 1e-05 0.000504
GO:0043155 negative regulation of photosynthesis, light reaction 6.52% (3/46) 6.19 1e-05 0.000504
GO:0034766 negative regulation of ion transmembrane transport 8.7% (4/46) 5.06 7e-06 0.000509
GO:1905156 negative regulation of photosynthesis 6.52% (3/46) 6.15 1.1e-05 0.000515
GO:2000034 regulation of seed maturation 8.7% (4/46) 5.02 7e-06 0.000519
GO:0001933 negative regulation of protein phosphorylation 8.7% (4/46) 4.55 2.6e-05 0.0012
GO:0080050 regulation of seed development 8.7% (4/46) 4.45 3.4e-05 0.001261
GO:0009788 negative regulation of abscisic acid-activated signaling pathway 10.87% (5/46) 3.77 3.3e-05 0.001278
GO:1901420 negative regulation of response to alcohol 10.87% (5/46) 3.77 3.3e-05 0.001278
GO:1905958 negative regulation of cellular response to alcohol 10.87% (5/46) 3.77 3.3e-05 0.001278
GO:0010359 regulation of anion channel activity 8.7% (4/46) 4.37 4.2e-05 0.001501
GO:0042326 negative regulation of phosphorylation 8.7% (4/46) 4.33 4.8e-05 0.001613
GO:1903959 regulation of anion transmembrane transport 8.7% (4/46) 4.3 5.1e-05 0.001656
GO:0009939 positive regulation of gibberellic acid mediated signaling pathway 6.52% (3/46) 5.32 6e-05 0.001878
GO:0042548 regulation of photosynthesis, light reaction 6.52% (3/46) 5.21 7.6e-05 0.002262
GO:0006469 negative regulation of protein kinase activity 6.52% (3/46) 5.11 9.3e-05 0.002683
GO:0044070 regulation of anion transport 8.7% (4/46) 4.0 0.000117 0.003244
GO:2000033 regulation of seed dormancy process 6.52% (3/46) 4.98 0.000122 0.003269
GO:0010563 negative regulation of phosphorus metabolic process 8.7% (4/46) 3.94 0.000135 0.003271
GO:0045936 negative regulation of phosphate metabolic process 8.7% (4/46) 3.94 0.000135 0.003271
GO:0033673 negative regulation of kinase activity 6.52% (3/46) 4.94 0.000131 0.003398
GO:0051051 negative regulation of transport 8.7% (4/46) 3.74 0.000229 0.005399
GO:0010109 regulation of photosynthesis 6.52% (3/46) 4.39 0.000408 0.009063
GO:0010162 seed dormancy process 6.52% (3/46) 4.39 0.000408 0.009063
GO:0051607 defense response to virus 8.7% (4/46) 3.46 0.000475 0.009982
GO:0140546 defense response to symbiont 8.7% (4/46) 3.46 0.000475 0.009982
GO:0010030 positive regulation of seed germination 6.52% (3/46) 4.27 0.000514 0.010507
GO:0043269 regulation of ion transport 10.87% (5/46) 2.86 0.000614 0.010851
GO:0022898 regulation of transmembrane transporter activity 8.7% (4/46) 3.37 0.000602 0.010873
GO:0032412 regulation of ion transmembrane transporter activity 8.7% (4/46) 3.38 0.000588 0.01088
GO:0046634 regulation of alpha-beta T cell activation 4.35% (2/46) 5.82 0.000577 0.010937
GO:0046635 positive regulation of alpha-beta T cell activation 4.35% (2/46) 5.82 0.000577 0.010937
GO:0032409 regulation of transporter activity 8.7% (4/46) 3.35 0.000644 0.011117
GO:0022611 dormancy process 6.52% (3/46) 4.14 0.000675 0.011406
GO:0051348 negative regulation of transferase activity 6.52% (3/46) 4.22 0.000573 0.011408
GO:1902456 regulation of stomatal opening 6.52% (3/46) 4.09 0.000745 0.012316
GO:2000242 negative regulation of reproductive process 8.7% (4/46) 3.11 0.001177 0.018285
GO:0016311 dephosphorylation 8.7% (4/46) 3.11 0.001177 0.018285
GO:0031400 negative regulation of protein modification process 8.7% (4/46) 3.13 0.001133 0.018343
GO:1901419 regulation of response to alcohol 10.87% (5/46) 2.62 0.001274 0.018671
GO:1905957 regulation of cellular response to alcohol 10.87% (5/46) 2.62 0.001274 0.018671
GO:0009787 regulation of abscisic acid-activated signaling pathway 10.87% (5/46) 2.63 0.001257 0.019156
GO:0050870 positive regulation of T cell activation 4.35% (2/46) 5.18 0.001416 0.019647
GO:1903039 positive regulation of leukocyte cell-cell adhesion 4.35% (2/46) 5.18 0.001416 0.019647
GO:0034765 regulation of ion transmembrane transport 8.7% (4/46) 3.04 0.001412 0.020314
GO:0051240 positive regulation of multicellular organismal process 13.04% (6/46) 2.25 0.001541 0.021002
GO:0022409 positive regulation of cell-cell adhesion 4.35% (2/46) 5.09 0.001601 0.021449
GO:1903037 regulation of leukocyte cell-cell adhesion 4.35% (2/46) 5.03 0.00173 0.022789
GO:0009937 regulation of gibberellic acid mediated signaling pathway 6.52% (3/46) 3.64 0.001828 0.023668
GO:0050863 regulation of T cell activation 4.35% (2/46) 4.9 0.002075 0.025193
GO:0044092 negative regulation of molecular function 10.87% (5/46) 2.48 0.00199 0.025348
GO:0034762 regulation of transmembrane transport 8.7% (4/46) 2.9 0.002025 0.025381
GO:0009644 response to high light intensity 6.52% (3/46) 3.57 0.002065 0.02547
GO:0043467 regulation of generation of precursor metabolites and energy 6.52% (3/46) 3.53 0.002234 0.0267
GO:0006470 protein dephosphorylation 6.52% (3/46) 3.5 0.00241 0.028377
GO:0001932 regulation of protein phosphorylation 8.7% (4/46) 2.78 0.002703 0.03135
GO:0009658 chloroplast organization 8.7% (4/46) 2.77 0.002803 0.032026
GO:0009615 response to virus 8.7% (4/46) 2.73 0.003116 0.035092
GO:0045345 positive regulation of MHC class I biosynthetic process 2.17% (1/46) 8.15 0.003526 0.038056
GO:0051133 regulation of NK T cell activation 2.17% (1/46) 8.15 0.003526 0.038056
GO:0051135 positive regulation of NK T cell activation 2.17% (1/46) 8.15 0.003526 0.038056
GO:0051251 positive regulation of lymphocyte activation 4.35% (2/46) 4.41 0.004039 0.042985
GO:0019901 protein kinase binding 8.7% (4/46) 2.55 0.004812 0.045592
GO:0002696 positive regulation of leukocyte activation 4.35% (2/46) 4.29 0.004756 0.045624
GO:0022407 regulation of cell-cell adhesion 4.35% (2/46) 4.34 0.004442 0.046018
GO:0045859 regulation of protein kinase activity 6.52% (3/46) 3.15 0.004755 0.046185
GO:0045691 regulation of embryo sac central cell differentiation 2.17% (1/46) 7.73 0.004699 0.046219
GO:0045697 regulation of synergid differentiation 2.17% (1/46) 7.73 0.004699 0.046219
GO:0045343 regulation of MHC class I biosynthetic process 2.17% (1/46) 7.73 0.004699 0.046219
GO:0009657 plastid organization 8.7% (4/46) 2.58 0.004415 0.046363
GO:0042325 regulation of phosphorylation 8.7% (4/46) 2.57 0.004554 0.046562
GO:0045785 positive regulation of cell adhesion 4.35% (2/46) 4.24 0.00508 0.04756
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_178 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_211 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_236 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_319 0.022 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_11 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_14 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_15 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_28 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_33 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_45 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_51 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_54 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_64 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_70 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_85 0.034 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_101 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_105 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_123 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_125 0.034 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_129 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_131 0.011 Orthogroups with 8 Potato genotypes Compare
Sequences (46) (download table)

InterPro Domains

GO Terms

Family Terms