Coexpression cluster: Cluster_201 (HCCA Clusters (HRR 50 & PCC 0.5))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016773 phosphotransferase activity, alcohol group as acceptor 67.35% (33/49) 3.75 0.0 0.0
GO:0004672 protein kinase activity 63.27% (31/49) 3.79 0.0 0.0
GO:0016772 transferase activity, transferring phosphorus-containing groups 67.35% (33/49) 3.49 0.0 0.0
GO:0016301 kinase activity 65.31% (32/49) 3.59 0.0 0.0
GO:0016310 phosphorylation 61.22% (30/49) 3.64 0.0 0.0
GO:0004674 protein serine/threonine kinase activity 53.06% (26/49) 3.94 0.0 0.0
GO:0098542 defense response to other organism 69.39% (34/49) 2.64 0.0 0.0
GO:0006796 phosphate-containing compound metabolic process 61.22% (30/49) 2.86 0.0 0.0
GO:0006793 phosphorus metabolic process 61.22% (30/49) 2.83 0.0 0.0
GO:0006952 defense response 71.43% (35/49) 2.4 0.0 0.0
GO:0009751 response to salicylic acid 40.82% (20/49) 4.12 0.0 0.0
GO:0140096 catalytic activity, acting on a protein 65.31% (32/49) 2.66 0.0 0.0
GO:0043207 response to external biotic stimulus 73.47% (36/49) 2.2 0.0 0.0
GO:0009737 response to abscisic acid 46.94% (23/49) 3.44 0.0 0.0
GO:0009607 response to biotic stimulus 73.47% (36/49) 2.17 0.0 0.0
GO:0006468 protein phosphorylation 44.9% (22/49) 3.48 0.0 0.0
GO:0097305 response to alcohol 46.94% (23/49) 3.27 0.0 0.0
GO:0051707 response to other organism 69.39% (34/49) 2.21 0.0 0.0
GO:0016740 transferase activity 69.39% (34/49) 2.2 0.0 0.0
GO:0044419 biological process involved in interspecies interaction between organisms 69.39% (34/49) 2.17 0.0 0.0
GO:0009605 response to external stimulus 75.51% (37/49) 1.92 0.0 0.0
GO:1901700 response to oxygen-containing compound 69.39% (34/49) 2.09 0.0 0.0
GO:0012501 programmed cell death 32.65% (16/49) 3.96 0.0 0.0
GO:0042742 defense response to bacterium 40.82% (20/49) 3.24 0.0 0.0
GO:0005773 vacuole 40.82% (20/49) 3.22 0.0 0.0
GO:0014070 response to organic cyclic compound 42.86% (21/49) 3.06 0.0 0.0
GO:0005886 plasma membrane 61.22% (30/49) 2.16 0.0 0.0
GO:0038023 signaling receptor activity 30.61% (15/49) 3.97 0.0 0.0
GO:0008219 cell death 32.65% (16/49) 3.73 0.0 0.0
GO:0009617 response to bacterium 44.9% (22/49) 2.83 0.0 0.0
GO:0033993 response to lipid 51.02% (25/49) 2.53 0.0 0.0
GO:0060089 molecular transducer activity 30.61% (15/49) 3.9 0.0 0.0
GO:0010033 response to organic substance 67.35% (33/49) 1.89 0.0 0.0
GO:0006950 response to stress 79.59% (39/49) 1.51 0.0 0.0
GO:0009719 response to endogenous stimulus 55.1% (27/49) 2.2 0.0 0.0
GO:0000302 response to reactive oxygen species 28.57% (14/49) 3.84 0.0 0.0
GO:0009725 response to hormone 53.06% (26/49) 2.24 0.0 0.0
GO:0042221 response to chemical 71.43% (35/49) 1.55 0.0 0.0
GO:0016020 membrane 75.51% (37/49) 1.42 0.0 0.0
GO:0036211 protein modification process 46.94% (23/49) 2.21 0.0 0.0
GO:0050896 response to stimulus 83.67% (41/49) 1.11 0.0 0.0
GO:0006979 response to oxidative stress 30.61% (15/49) 2.92 0.0 0.0
GO:0043412 macromolecule modification 46.94% (23/49) 1.97 0.0 0.0
GO:0019538 protein metabolic process 48.98% (24/49) 1.86 0.0 0.0
GO:0005515 protein binding 79.59% (39/49) 1.07 0.0 0.0
GO:0003824 catalytic activity 73.47% (36/49) 1.15 0.0 0.0
GO:0004888 transmembrane signaling receptor activity 16.33% (8/49) 4.12 0.0 0.0
GO:0044237 cellular metabolic process 71.43% (35/49) 1.08 0.0 2e-06
GO:0005488 binding 85.71% (42/49) 0.78 0.0 3e-06
GO:0032870 cellular response to hormone stimulus 16.33% (8/49) 3.44 1e-06 1.1e-05
GO:0032497 detection of lipopolysaccharide 8.16% (4/49) 5.86 1e-06 1.1e-05
GO:0038187 pattern recognition receptor activity 8.16% (4/49) 5.86 1e-06 1.1e-05
GO:0004713 protein tyrosine kinase activity 12.24% (6/49) 4.25 1e-06 1.2e-05
GO:0032490 detection of molecule of bacterial origin 8.16% (4/49) 5.6 1e-06 2.3e-05
GO:1901564 organonitrogen compound metabolic process 53.06% (26/49) 1.28 2e-06 2.4e-05
GO:0002221 pattern recognition receptor signaling pathway 12.24% (6/49) 4.06 2e-06 2.4e-05
GO:0008152 metabolic process 73.47% (36/49) 0.89 2e-06 2.5e-05
GO:0007166 cell surface receptor signaling pathway 14.29% (7/49) 3.51 3e-06 3.6e-05
GO:0071215 cellular response to abscisic acid stimulus 10.2% (5/49) 4.41 4e-06 5.2e-05
GO:0043231 intracellular membrane-bounded organelle 67.35% (33/49) 0.95 4e-06 5.2e-05
GO:0032496 response to lipopolysaccharide 10.2% (5/49) 4.39 4e-06 5.5e-05
GO:0071495 cellular response to endogenous stimulus 18.37% (9/49) 2.82 4e-06 5.7e-05
GO:0043227 membrane-bounded organelle 67.35% (33/49) 0.93 5e-06 6.5e-05
GO:0050776 regulation of immune response 20.41% (10/49) 2.47 1e-05 0.000125
GO:0043170 macromolecule metabolic process 51.02% (25/49) 1.19 1.1e-05 0.000134
GO:0002376 immune system process 22.45% (11/49) 2.28 1.2e-05 0.000145
GO:0097306 cellular response to alcohol 10.2% (5/49) 4.07 1.2e-05 0.000147
GO:0031625 ubiquitin protein ligase binding 12.24% (6/49) 3.46 1.7e-05 0.000206
GO:0009987 cellular process 81.63% (40/49) 0.64 1.8e-05 0.000208
GO:0003674 molecular_function 87.76% (43/49) 0.55 1.8e-05 0.000209
GO:0044389 ubiquitin-like protein ligase binding 12.24% (6/49) 3.39 2.2e-05 0.000251
GO:0007165 signal transduction 32.65% (16/49) 1.65 2.2e-05 0.000252
GO:0071310 cellular response to organic substance 20.41% (10/49) 2.33 2.3e-05 0.000257
GO:0019199 transmembrane receptor protein kinase activity 10.2% (5/49) 3.86 2.4e-05 0.000264
GO:0031663 lipopolysaccharide-mediated signaling pathway 8.16% (4/49) 4.58 2.4e-05 0.000267
GO:0033612 receptor serine/threonine kinase binding 8.16% (4/49) 4.48 3.2e-05 0.000345
GO:0002682 regulation of immune system process 20.41% (10/49) 2.26 3.5e-05 0.000378
GO:0045087 innate immune response 16.33% (8/49) 2.64 3.8e-05 0.000398
GO:0002237 response to molecule of bacterial origin 12.24% (6/49) 3.24 4.1e-05 0.000423
GO:0046777 protein autophosphorylation 16.33% (8/49) 2.61 4.3e-05 0.000441
GO:0008150 biological_process 87.76% (43/49) 0.51 4.9e-05 0.000491
GO:0098581 detection of external biotic stimulus 8.16% (4/49) 4.28 5.5e-05 0.000546
GO:0006807 nitrogen compound metabolic process 55.1% (27/49) 0.98 5.8e-05 0.000563
GO:0009595 detection of biotic stimulus 8.16% (4/49) 4.26 5.7e-05 0.000566
GO:0006955 immune response 16.33% (8/49) 2.52 6.7e-05 0.00065
GO:0002764 immune response-regulating signaling pathway 12.24% (6/49) 3.09 7e-05 0.000672
GO:0043229 intracellular organelle 67.35% (33/49) 0.75 9.6e-05 0.000901
GO:0043226 organelle 67.35% (33/49) 0.75 0.000109 0.001016
GO:0001614 purinergic nucleotide receptor activity 4.08% (2/49) 6.73 0.00016 0.001426
GO:0016502 nucleotide receptor activity 4.08% (2/49) 6.73 0.00016 0.001426
GO:0045028 G protein-coupled purinergic nucleotide receptor activity 4.08% (2/49) 6.73 0.00016 0.001426
GO:0005524 ATP binding 20.41% (10/49) 2.0 0.000157 0.001451
GO:0071396 cellular response to lipid 10.2% (5/49) 3.23 0.000189 0.001665
GO:0009593 detection of chemical stimulus 8.16% (4/49) 3.78 0.000208 0.001812
GO:0044238 primary metabolic process 57.14% (28/49) 0.84 0.000226 0.001951
GO:0000166 nucleotide binding 28.57% (14/49) 1.49 0.000262 0.002217
GO:1901265 nucleoside phosphate binding 28.57% (14/49) 1.49 0.000262 0.002217
GO:0106310 protein serine kinase activity 10.2% (5/49) 3.11 0.000278 0.002324
GO:0032559 adenyl ribonucleotide binding 20.41% (10/49) 1.89 0.000289 0.002394
GO:0030554 adenyl nucleotide binding 20.41% (10/49) 1.88 0.000301 0.002469
GO:0009755 hormone-mediated signaling pathway 18.37% (9/49) 2.02 0.000316 0.002543
GO:1901701 cellular response to oxygen-containing compound 16.33% (8/49) 2.19 0.000315 0.002555
GO:0110165 cellular anatomical entity 83.67% (41/49) 0.48 0.000351 0.002798
GO:0051606 detection of stimulus 10.2% (5/49) 3.0 0.000392 0.003089
GO:0035639 purine ribonucleoside triphosphate binding 20.41% (10/49) 1.79 0.000483 0.003771
GO:0005575 cellular_component 83.67% (41/49) 0.46 0.000535 0.004139
GO:0048658 anther wall tapetum development 6.12% (3/49) 4.19 0.000606 0.00464
GO:0036094 small molecule binding 28.57% (14/49) 1.35 0.000724 0.005497
GO:0004930 G protein-coupled receptor activity 4.08% (2/49) 5.64 0.000745 0.005608
GO:0031348 negative regulation of defense response 10.2% (5/49) 2.75 0.000862 0.00637
GO:0032555 purine ribonucleotide binding 20.41% (10/49) 1.69 0.000871 0.006373
GO:0070887 cellular response to chemical stimulus 22.45% (11/49) 1.58 0.000857 0.006387
GO:0017076 purine nucleotide binding 20.41% (10/49) 1.68 0.000915 0.006637
GO:0002831 regulation of response to biotic stimulus 16.33% (8/49) 1.93 0.001048 0.007536
GO:0032553 ribonucleotide binding 20.41% (10/49) 1.65 0.001074 0.007658
GO:0071472 cellular response to salt stress 6.12% (3/49) 3.88 0.001119 0.007913
GO:0070403 NAD+ binding 4.08% (2/49) 5.32 0.001165 0.008163
GO:0071369 cellular response to ethylene stimulus 4.08% (2/49) 5.28 0.001224 0.008502
GO:0071704 organic substance metabolic process 59.18% (29/49) 0.68 0.001318 0.009082
GO:0140426 PAMP-triggered immunity signalling pathway 4.08% (2/49) 5.18 0.001408 0.009622
GO:0097367 carbohydrate derivative binding 20.41% (10/49) 1.57 0.00164 0.011113
GO:1900425 negative regulation of defense response to bacterium 6.12% (3/49) 3.64 0.00182 0.012235
GO:0061594 6-deoxy-6-sulfofructose kinase activity 2.04% (1/49) 8.64 0.002506 0.016178
GO:0061720 6-sulfoquinovose(1-) catabolic process to glycerone phosphate and 3-sulfolactaldehyde 2.04% (1/49) 8.64 0.002506 0.016178
GO:1902776 6-sulfoquinovose(1-) metabolic process 2.04% (1/49) 8.64 0.002506 0.016178
GO:1902777 6-sulfoquinovose(1-) catabolic process 2.04% (1/49) 8.64 0.002506 0.016178
GO:0032101 regulation of response to external stimulus 16.33% (8/49) 1.73 0.002482 0.016548
GO:0031347 regulation of defense response 16.33% (8/49) 1.66 0.003382 0.021664
GO:0051716 cellular response to stimulus 30.61% (15/49) 1.06 0.00357 0.022693
GO:0042802 identical protein binding 20.41% (10/49) 1.41 0.003676 0.023008
GO:0090333 regulation of stomatal closure 6.12% (3/49) 3.28 0.003706 0.023025
GO:0005102 signaling receptor binding 8.16% (4/49) 2.66 0.003659 0.02308
GO:0019303 D-ribose catabolic process 2.04% (1/49) 8.05 0.003756 0.023158
GO:0071470 cellular response to osmotic stress 6.12% (3/49) 3.17 0.00451 0.027596
GO:0005262 calcium channel activity 4.08% (2/49) 4.26 0.00491 0.029825
GO:0004747 ribokinase activity 2.04% (1/49) 7.64 0.005005 0.029958
GO:0006014 D-ribose metabolic process 2.04% (1/49) 7.64 0.005005 0.029958
GO:0071446 cellular response to salicylic acid stimulus 4.08% (2/49) 4.21 0.005261 0.031263
GO:0019694 alkanesulfonate metabolic process 2.04% (1/49) 7.32 0.006253 0.036885
GO:0051321 meiotic cell cycle 6.12% (3/49) 2.94 0.007014 0.041083
GO:0043168 anion binding 20.41% (10/49) 1.27 0.007105 0.04132
GO:0008127 quercetin 2,3-dioxygenase activity 2.04% (1/49) 7.05 0.007498 0.043301
GO:0030579 ubiquitin-dependent SMAD protein catabolic process 2.04% (1/49) 6.83 0.008743 0.049442
GO:0070911 global genome nucleotide-excision repair 2.04% (1/49) 6.83 0.008743 0.049442
GO:0030224 monocyte differentiation 2.04% (1/49) 6.83 0.008743 0.049442
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_216 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_223 0.015 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_259 0.024 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_266 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_298 0.018 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_323 0.025 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_345 0.029 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_8 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_17 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_20 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_38 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_51 0.026 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_53 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_60 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_79 0.019 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_97 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_99 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_121 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_129 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_136 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_144 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_158 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_163 0.013 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_177 0.016 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_182 0.025 Orthogroups with 8 Potato genotypes Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms