Coexpression cluster: Cluster_178 (HCCA Clusters (HRR 50 & PCC 0.5))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0004650 polygalacturonase activity 8.47% (5/59) 6.02 0.0 6e-06
GO:0010047 fruit dehiscence 10.17% (6/59) 5.22 0.0 1.1e-05
GO:0009901 anther dehiscence 10.17% (6/59) 4.85 0.0 1.3e-05
GO:0045490 pectin catabolic process 10.17% (6/59) 4.87 0.0 1.6e-05
GO:0047911 galacturan 1,4-alpha-galacturonidase activity 6.78% (4/59) 6.46 0.0 1.9e-05
GO:0043667 pollen wall 6.78% (4/59) 6.33 0.0 2.4e-05
GO:0009900 dehiscence 10.17% (6/59) 4.28 1e-06 7.6e-05
GO:0019863 IgE binding 6.78% (4/59) 5.62 1e-06 0.000134
GO:0019865 immunoglobulin binding 6.78% (4/59) 5.39 3e-06 0.000222
GO:0009830 cell wall modification involved in abscission 5.08% (3/59) 6.43 6e-06 0.000361
GO:0044277 cell wall disassembly 5.08% (3/59) 6.43 6e-06 0.000361
GO:0048235 pollen sperm cell differentiation 8.47% (5/59) 4.34 5e-06 0.000379
GO:0000272 polysaccharide catabolic process 10.17% (6/59) 3.59 1.1e-05 0.00063
GO:0048868 pollen tube development 6.78% (4/59) 4.85 1.2e-05 0.000647
GO:0045488 pectin metabolic process 10.17% (6/59) 3.33 2.9e-05 0.001478
GO:0010393 galacturonan metabolic process 10.17% (6/59) 3.31 3.2e-05 0.001529
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 10.17% (6/59) 3.11 6.9e-05 0.003113
GO:0016052 carbohydrate catabolic process 10.17% (6/59) 2.97 0.000118 0.005
GO:0009838 abscission 6.78% (4/59) 3.66 0.000292 0.011772
GO:0009846 pollen germination 6.78% (4/59) 3.53 0.000406 0.015518
GO:0016798 hydrolase activity, acting on glycosyl bonds 10.17% (6/59) 2.51 0.00064 0.023323
GO:0010227 floral organ abscission 5.08% (3/59) 3.84 0.001237 0.043001
GO:0009827 plant-type cell wall modification 6.78% (4/59) 3.05 0.001424 0.047362
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_182 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_185 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_195 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_211 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_214 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_321 0.016 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_2 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_12 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_14 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_30 0.014 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_33 0.021 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_74 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_76 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_79 0.008 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_84 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_86 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_93 0.011 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_94 0.007 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_102 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_103 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_109 0.012 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_127 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_131 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_147 0.009 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_168 0.01 Orthogroups with 8 Potato genotypes Compare
Solanum tuberosum Agria HCCA Clusters (HRR 50 & PCC 0.5) Cluster_170 0.011 Orthogroups with 8 Potato genotypes Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms